Leveraging genomic surveillance to enhance elimination strategies for hepatitis C virus

por Tully, Damien C
Publicado 2022

Unravelling Selection Shifts Among Foot-and-Mouth Disease Virus (FMDV) Serotypes

por Tully, Damien C., Fares, Mario A.
Publicado 2007

Characteristics of HCV Co-Infection among HIV Infected Individuals from an Area with High Risk of Blood-Borne Infections in Central China

por Zhang, Tiejun, Tully, Damien C., Zhou, Sujuan, He, Na
Publicado 2014

Restricted Genetic Diversity of HIV-1 Subtype C Envelope Glycoprotein from Perinatally Infected Zambian Infants

por Zhang, Hong, Tully, Damien C., Hoffmann, Federico G., He, Jun, Kankasa, Chipepo, Wood, Charles
Publicado 2010

Correction: Restricted Genetic Diversity of HIV-1 Subtype C Envelope Glycoprotein from Perinatally Infected Zambian Infants

por Zhang, Hong, Tully, Damien C., Hoffmann, Federico G., He, Jun, Kankasa, Chipepo, Wood, Charles
Publicado 2010

Correction: Restricted Genetic Diversity of HIV-1 Subtype C Envelope Glycoprotein from Perinatally Infected Zambian Infants

por Zhang, Hong, Tully, Damien C., Hoffmann, Federico G., He, Jun, Kankasa, Chipepo, Wood, Charles
Publicado 2010

Dynamics of Envelope Evolution in Clade C SHIV-Infected Pig-Tailed Macaques during Disease Progression Analyzed by Ultra-Deep Pyrosequencing

por Tso, For Yue, Tully, Damien C., Gonzalez, Sandra, Quince, Christopher, Ho, On, Polacino, Patricia, Ruprecht, Ruth M., Hu, Shiu-Lok, Wood, Charles
Publicado 2012

Role of HCV Viremia in Corroborated HCV Transmission Events Within Young Adult Injecting Partnerships

por Hahn, Judith A, Tully, Damien C, Evans, Jennifer L, Morris, Meghan D, Briceno, Alya, Bean, David J, Allen, Todd M, Page, Kimberly
Publicado 2019

Use of Dried Blood Spots to Elucidate Full-Length Transmitted/Founder HIV-1 Genomes

por Salazar-Gonzalez, Jesus F., Salazar, Maria G., Tully, Damien C., Ogilvie, Colin B., Learn, Gerald H., Allen, Todd M., Heath, Sonya L., Goepfert, Paul, Bar, Katharine J.
Publicado 2016

Lower Broadly Neutralizing Antibody Responses in Female Versus Male HIV-1 Infected Injecting Drug Users

por EULER, Zelda, VAN DEN KERKHOF, Tom L., KOUYOS, Roger D., TULLY, Damien C., ALLEN, Todd M., TRKOLA, Alexandra, SANDERS, Rogier W., SCHUITEMAKER, Hanneke, VAN GILS, Marit J.
Publicado 2019

Metagenomic Sequencing of HIV-1 in the Blood and Female Genital Tract Reveals Little Quasispecies Diversity during Acute Infection

por Piantadosi, Anne, Freije, Catherine A., Gosmann, Christina, Ye, Simon, Park, Daniel, Schaffner, Stephen F., Tully, Damien C., Allen, Todd M., Dong, Krista L., Sabeti, Pardis C., Kwon, Douglas S.
Publicado 2019

Validation of Dried Blood Spots for Capturing Hepatitis C Virus Diversity for Genomic Surveillance

por Tully, Damien C., Power, Karen A., Sarette, Jacklyn, Stopka, Thomas J., Friedmann, Peter D., Korthuis, P. Todd, Cooper, Hannah, Young, April M., Seal, David W., Westergaard, Ryan P., Allen, Todd M.
Publicado 2023

Hepatitis C Virus Transmission Clusters in Public Health and Correctional Settings, Wisconsin, USA, 2016–2017

por Hochstatter, Karli R., Tully, Damien C., Power, Karen A., Koepke, Ruth, Akhtar, Wajiha Z., Prieve, Audrey F., Whyte, Thomas, Bean, David J., Seal, David W., Allen, Todd M., Westergaard, Ryan P.
Publicado 2021

High resolution sequencing of hepatitis C virus reveals limited intra-hepatic compartmentalization in end-stage liver disease

por Hedegaard, Ditte L., Tully, Damien C., Rowe, Ian A., Reynolds, Gary M., Bean, David J., Hu, Ke, Davis, Christopher, Wilhelm, Annika, Ogilvie, Colin B., Power, Karen A., Tarr, Alexander W., Kelly, Deirdre, Allen, Todd M., Balfe, Peter, McKeating, Jane A.
Publicado 2017

HIVR4P 2016, Partnering for Prevention: Conference Summary and Highlights

por Shacklett, Barbara L., Derdeyn, Cynthia A., Folayan, Morenike Oluwatoyin, Landovitz, Raphael J., Anthony, Colin, Behrens, Anna-Janina, Hope, Thomas J., Landais, Elise, Leal, Lorna, Marrazzo, Jeanne M., Morris, Lynn, Mugo, Nelly, Ngure, Kenneth, Noseda, Veronica, Ranasinghe, Srinika, Tully, Damien C., Voronin, Yegor, Warren, Mitchell, Wibmer, Constantinos Kurt, Xie, Irene Y., Scarlatti, Gabriella, Thyagarajan, Bargavi
Publicado 2017

Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England

por Davies, Nicholas G., Abbott, Sam, Barnard, Rosanna C., Jarvis, Christopher I., Kucharski, Adam J., Munday, James D., Pearson, Carl A. B., Russell, Timothy W., Tully, Damien C., Washburne, Alex D., Wenseleers, Tom, Gimma, Amy, Waites, William, Wong, Kerry L. M., van Zandvoort, Kevin, Silverman, Justin D., Diaz-Ordaz, Karla, Keogh, Ruth, Eggo, Rosalind M., Funk, Sebastian, Jit, Mark, Atkins, Katherine E., Edmunds, W. John
Publicado 2021

Differences in the Selection Bottleneck between Modes of Sexual Transmission Influence the Genetic Composition of the HIV-1 Founder Virus

por Tully, Damien C., Ogilvie, Colin B., Batorsky, Rebecca E., Bean, David J., Power, Karen A., Ghebremichael, Musie, Bedard, Hunter E., Gladden, Adrianne D., Seese, Aaron M., Amero, Molly A., Lane, Kimberly, McGrath, Graham, Bazner, Suzane B., Tinsley, Jake, Lennon, Niall J., Henn, Matthew R., Brumme, Zabrina L., Norris, Philip J., Rosenberg, Eric S., Mayer, Kenneth H., Jessen, Heiko, Kosakovsky Pond, Sergei L., Walker, Bruce D., Altfeld, Marcus, Carlson, Jonathan M., Allen, Todd M.
Publicado 2016

Differentiation of exhausted CD8 T cells after termination of chronic antigen stimulation stops short of achieving functional T cell memory

por Tonnerre, Pierre, Wolski, David, Subudhi, Sonu, Al-Jabban, Jihad, Hoogeveen, Ruben C., Damasio, Marcos, Drescher, Hannah K., Bartsch, Lea M., Tully, Damien C., Sen, Debattama R., Bean, David J., Brown, Joelle, Torres-Cornejo, Almudena, Robidoux, Maxwell, Kvistad, Daniel, Alatrakchi, Nadia, Cui, Ang, Lieb, David, Cheney, James A., Gustafson, Jenna, Lewis-Ximenez, Lia L, Massenet-Regad, Lucile, Eisenhaure, Thomas, Aneja, Jasneet, Haining, W. Nicholas, Chung, Raymond T., Hacohen, Nir, Allen, Todd M., Kim, Arthur Y., Lauer, Georg M.
Publicado 2021

Capturing sequence diversity in metagenomes with comprehensive and scalable probe design

por Metsky, Hayden C., Siddle, Katherine J., Gladden-Young, Adrianne, Qu, James, Yang, David K., Brehio, Patrick, Goldfarb, Andrew, Piantadosi, Anne, Wohl, Shirlee, Carter, Amber, Lin, Aaron E., Barnes, Kayla G., Tully, Damien C., Corleis, Bjӧrn, Hennigan, Scott, Barbosa-Lima, Giselle, Vieira, Yasmine R., Paul, Lauren M., Tan, Amanda L., Garcia, Kimberly F., Parham, Leda A., Odia, Ikponmwosa, Eromon, Philomena, Folarin, Onikepe A., Goba, Augustine, Simon-Lorière, Etienne, Hensley, Lisa, Balmaseda, Angel, Harris, Eva, Kwon, Douglas S., Allen, Todd M., Runstadler, Jonathan A., Smole, Sandra, Bozza, Fernando A., Souza, Thiago M. L., Isern, Sharon, Michael, Scott F., Lorenzana, Ivette, Gehrke, Lee, Bosch, Irene, Ebel, Gregory, Grant, Donald S., Happi, Christian T., Park, Daniel J., Gnirke, Andreas, Sabeti, Pardis C., Matranga, Christian B.
Publicado 2019

The importance of saturating density dependence for population-level predictions of SARS-CoV-2 resurgence compared with density-independent or linearly density-dependent models, En...

por Nightingale, Emily S, Brady, Oliver J, Yakob, Laith, Gimma, Amy, Jit, Mark, Jarvis, Christopher I, Waterlow, Naomi R, Procter, Simon R, Auzenbergs, Megan, Tully, Damien C, Simons, David, Endo, Akira, Hellewell, Joel, Lowe, Rachel, Foss, Anna M, van Zandvoort, Kevin, Pearson, Carl AB, Showering, Alicia, Klepac, Petra, Medley, Graham, Quilty, Billy J, Diamond, Charlie, Edmunds, W John, Rosello, Alicia, Barnard, Rosanna C, Abbas, Kaja, Sherratt, Katharine, Williams, Jack, Meakin, Sophie R, Quaife, Matthew, Russell, Timothy W, Villabona-Arenas, C Julian, Prem, Kiesha, Sun, Fiona Yueqian, Davies, Nicholas G, Eggo, Rosalind M, Knight, Gwenan M, Kucharski, Adam J, Sandmann, Frank G, Funk, Sebastian, Gore-Langton, Georgia R, Flasche, Stefan, Jombart, Thibaut, Gibbs, Hamish P, Liu, Yang, Brady, Oliver, Bosse, Nikos I, Chan, Yung-Wai Desmond, Abbott, Sam, Clifford, Samuel, Atkins, Katherine E, Nightingale, Emily S, Munday, James D
Publicado 2021