An en masse phenotype and function prediction system for Mus musculus

por Taşan, Murat, Tian, Weidong, Hill, David P, Gibbons, Francis D, Blake, Judith A, Roth, Frederick P
Publicado 2008

FuncBase : a resource for quantitative gene function annotation

por Beaver, John E., Taşan, Murat, Gibbons, Francis D., Tian, Weidong, Hughes, Timothy R., Roth, Frederick P.
Publicado 2010

A Resource of Quantitative Functional Annotation for Homo sapiens Genes

por Taşan, Murat, Drabkin, Harold J., Beaver, John E., Chua, Hon Nian, Dunham, Julie, Tian, Weidong, Blake, Judith A., Roth, Frederick P.
Publicado 2012

Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function

por Tian, Weidong, Zhang, Lan V, Taşan, Murat, Gibbons, Francis D, King, Oliver D, Park, Julie, Wunderlich, Zeba, Cherry, J Michael, Roth, Frederick P
Publicado 2008

Genome Analysis Reveals Interplay between 5′UTR Introns and Nuclear mRNA Export for Secretory and Mitochondrial Genes

por Cenik, Can, Chua, Hon Nian, Zhang, Hui, Tarnawsky, Stefan P., Akef, Abdalla, Derti, Adnan, Tasan, Murat, Moore, Melissa J., Palazzo, Alexander F., Roth, Frederick P.
Publicado 2011

Prioritizing causal disease genes using unbiased genomic features

por Deo, Rahul C, Musso, Gabriel, Tasan, Murat, Tang, Paul, Poon, Annie, Yuan, Christiana, Felix, Janine F, Vasan, Ramachandran S, Beroukhim, Rameen, De Marco, Teresa, Kwok, Pui-Yan, MacRae, Calum A, Roth, Frederick P
Publicado 2014

Systematic exploration of synergistic drug pairs

por Cokol, Murat, Chua, Hon Nian, Tasan, Murat, Mutlu, Beste, Weinstein, Zohar B, Suzuki, Yo, Nergiz, Mehmet E, Costanzo, Michael, Baryshnikova, Anastasia, Giaever, Guri, Nislow, Corey, Myers, Chad L, Andrews, Brenda J, Boone, Charles, Roth, Frederick P
Publicado 2011

An experimentally derived confidence score for binary protein-protein interactions

por Braun, Pascal, Tasan, Murat, Dreze, Matija, Barrios-Rodiles, Miriam, Lemmens, Irma, Yu, Haiyuan, Sahalie, Julie M, Murray, Ryan R, Roncari, Luba, de Smet, Anne-Sophie, Venkatesan, Kavitha, Rual, Jean-François, Cusick, Michael E, Pawson, Tony, Hill, David E, Tavernier, Jan, Wrana, Jeffrey L, Roth, Frederick P, Vidal, Marc
Publicado 2008

A framework for exhaustively mapping functional missense variants

por Weile, Jochen, Sun, Song, Cote, Atina G, Knapp, Jennifer, Verby, Marta, Mellor, Joseph C, Wu, Yingzhou, Pons, Carles, Wong, Cassandra, van Lieshout, Natascha, Yang, Fan, Tasan, Murat, Tan, Guihong, Yang, Shan, Fowler, Douglas M, Nussbaum, Robert, Bloom, Jesse D, Vidal, Marc, Hill, David E, Aloy, Patrick, Roth, Frederick P
Publicado 2017

Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism

por Corominas, Roser, Yang, Xinping, Lin, Guan Ning, Kang, Shuli, Shen, Yun, Ghamsari, Lila, Broly, Martin, Rodriguez, Maria, Tam, Stanley, Wanamaker, Shelly A., Fan, Changyu, Yi, Song, Tasan, Murat, Lemmens, Irma, Kuang, Xingyan, Zhao, Nan, Malhotra, Dheeraj, Michaelson, Jacob J., Vacic, Vladimir, Calderwood, Michael A., Roth, Frederick P., Tavernier, Jan, Horvath, Steve, Salehi-Ashtiani, Kourosh, Korkin, Dmitry, Sebat, Jonathan, Hill, David E., Hao, Tong, Vidal, Marc, Iakoucheva, Lilia M.
Publicado 2014

An inter‐species protein–protein interaction network across vast evolutionary distance

por Zhong, Quan, Pevzner, Samuel J, Hao, Tong, Wang, Yang, Mosca, Roberto, Menche, Jörg, Taipale, Mikko, Taşan, Murat, Fan, Changyu, Yang, Xinping, Haley, Patrick, Murray, Ryan R, Mer, Flora, Gebreab, Fana, Tam, Stanley, MacWilliams, Andrew, Dricot, Amélie, Reichert, Patrick, Santhanam, Balaji, Ghamsari, Lila, Calderwood, Michael A, Rolland, Thomas, Charloteaux, Benoit, Lindquist, Susan, Barabási, Albert‐László, Hill, David E, Aloy, Patrick, Cusick, Michael E, Xia, Yu, Roth, Frederick P, Vidal, Marc
Publicado 2016

Author Correction: Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism

por Corominas, Roser, Yang, Xinping, Lin, Guan Ning, Kang, Shuli, Shen, Yun, Ghamsari, Lila, Broly, Martin, Rodriguez, Maria, Tam, Stanley, Wanamaker, Shelly A., Fan, Changyu, Yi, Song, Tasan, Murat, Lemmens, Irma, Kuang, Xingyan, Zhao, Nan, Malhotra, Dheeraj, Michaelson, Jacob J., Vacic, Vladimir, Calderwood, Michael A., Roth, Frederick P., Tavernier, Jan, Horvath, Steve, Salehi-Ashtiani, Kourosh, Korkin, Dmitry, Sebat, Jonathan, Hill, David E., Hao, Tong, Vidal, Marc, Iakoucheva, Lilia M.
Publicado 2023

A critical assessment of Mus musculus gene function prediction using integrated genomic evidence

por Peña-Castillo, Lourdes, Tasan, Murat, Myers, Chad L, Lee, Hyunju, Joshi, Trupti, Zhang, Chao, Guan, Yuanfang, Leone, Michele, Pagnani, Andrea, Kim, Wan Kyu, Krumpelman, Chase, Tian, Weidong, Obozinski, Guillaume, Qi, Yanjun, Mostafavi, Sara, Lin, Guan Ning, Berriz, Gabriel F, Gibbons, Francis D, Lanckriet, Gert, Qiu, Jian, Grant, Charles, Barutcuoglu, Zafer, Hill, David P, Warde-Farley, David, Grouios, Chris, Ray, Debajyoti, Blake, Judith A, Deng, Minghua, Jordan, Michael I, Noble, William S, Morris, Quaid, Klein-Seetharaman, Judith, Bar-Joseph, Ziv, Chen, Ting, Sun, Fengzhu, Troyanskaya, Olga G, Marcotte, Edward M, Xu, Dong, Hughes, Timothy R, Roth, Frederick P
Publicado 2008

Interpreting cancer genomes using systematic host perturbations by tumour virus proteins

por Rozenblatt-Rosen, Orit, Deo, Rahul C., Padi, Megha, Adelmant, Guillaume, Calderwood, Michael A., Rolland, Thomas, Grace, Miranda, Dricot, Amélie, Askenazi, Manor, Tavares, Maria, Pevzner, Sam, Abderazzaq, Fieda, Byrdsong, Danielle, Carvunis, Anne-Ruxandra, Chen, Alyce A., Cheng, Jingwei, Correll, Mick, Duarte, Melissa, Fan, Changyu, Feltkamp, Mariet C., Ficarro, Scott B., Franchi, Rachel, Garg, Brijesh K., Gulbahce, Natali, Hao, Tong, Holthaus, Amy M., James, Robert, Korkhin, Anna, Litovchick, Larisa, Mar, Jessica C., Pak, Theodore R., Rabello, Sabrina, Rubio, Renee, Shen, Yun, Singh, Saurav, Spangle, Jennifer M., Tasan, Murat, Wanamaker, Shelly, Webber, James T., Roecklein-Canfield, Jennifer, Johannsen, Eric, Barabási, Albert-László, Beroukhim, Rameen, Kieff, Elliott, Cusick, Michael E., Hill, David E., Münger, Karl, Marto, Jarrod A., Quackenbush, John, Roth, Frederick P., DeCaprio, James A., Vidal, Marc
Publicado 2012

A reference map of the human binary protein interactome

por Luck, Katja, Kim, Dae-Kyum, Lambourne, Luke, Spirohn, Kerstin, Begg, Bridget E., Bian, Wenting, Brignall, Ruth, Cafarelli, Tiziana, Campos-Laborie, Francisco J., Charloteaux, Benoit, Choi, Dongsic, Coté, Atina G., Daley, Meaghan, Deimling, Steven, Desbuleux, Alice, Dricot, Amélie, Gebbia, Marinella, Hardy, Madeleine F., Kishore, Nishka, Knapp, Jennifer J., Kovács, István A., Lemmens, Irma, Mee, Miles W., Mellor, Joseph C., Pollis, Carl, Pons, Carles, Richardson, Aaron D., Schlabach, Sadie, Teeking, Bridget, Yadav, Anupama, Babor, Mariana, Balcha, Dawit, Basha, Omer, Bowman-Colin, Christian, Chin, Suet-Feung, Choi, Soon Gang, Colabella, Claudia, Coppin, Georges, D’Amata, Cassandra, Ridder, David De, Rouck, Steffi De, Duran-Frigola, Miquel, Ennajdaoui, Hanane, Goebels, Florian, Goehring, Liana, Gopal, Anjali, Haddad, Ghazal, Hatchi, Elodie, Helmy, Mohamed, Jacob, Yves, Kassa, Yoseph, Landini, Serena, Li, Roujia, van Lieshout, Natascha, MacWilliams, Andrew, Markey, Dylan, Paulson, Joseph N., Rangarajan, Sudharshan, Rasla, John, Rayhan, Ashyad, Rolland, Thomas, San-Miguel, Adriana, Shen, Yun, Sheykhkarimli, Dayag, Sheynkman, Gloria M., Simonovsky, Eyal, Taşan, Murat, Tejeda, Alexander, Tropepe, Vincent, Twizere, Jean-Claude, Wang, Yang, Weatheritt, Robert J., Weile, Jochen, Xia, Yu, Yang, Xinping, Yeger-Lotem, Esti, Zhong, Quan, Aloy, Patrick, Bader, Gary D., Rivas, Javier De Las, Gaudet, Suzanne, Hao, Tong, Rak, Janusz, Tavernier, Jan, Hill, David E., Vidal, Marc, Roth, Frederick P., Calderwood, Michael A.
Publicado 2020