Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction

por Kamvar, Zhian N., Tabima, Javier F., Grünwald, Niklaus J.
Publicado 2014

Genome Sequence of the Estuarine Synechococcus sp. Strain NB0720_010

por MacKenzie, Campbell A., Marston, Marcia F., Tabima, Javier F., Ahlgren, Nathan A.
Publicado 2022

Genome-Wide Increased Copy Number is Associated with Emergence of Dominant Clones of the Irish Potato Famine Pathogen Phytophthora infestans

por Knaus, Brian J., Tabima, Javier F., Shakya, Shankar K., Judelson, Howard S., Grünwald, Niklaus J.
Publicado 2020

Gall-ID: tools for genotyping gall-causing phytopathogenic bacteria

por Davis II, Edward W., Weisberg, Alexandra J., Tabima, Javier F., Grunwald, Niklaus J., Chang, Jeff H.
Publicado 2016

QTL Analysis of Adult Plant Resistance to Stripe Rust in a Winter Wheat Recombinant Inbred Population

por Brandt, Kali M., Chen, Xianming, Tabima, Javier F., See, Deven R., Vining, Kelly J., Zemetra, Robert S.
Publicado 2021

The Dictyostelium discoideum genome lacks significant DNA methylation and uncovers palindromic sequences as a source of false positives in bisulfite sequencing

por Drewell, Robert A, Cormier, Tayla C, Steenwyk, Jacob L, Denis, James St, Tabima, Javier F, Dresch, Jacqueline M, Larochelle, Denis A
Publicado 2023

Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolu...

por Tabima, Javier F., Trautman, Ian A., Chang, Ying, Wang, Yan, Mondo, Stephen, Kuo, Alan, Salamov, Asaf, Grigoriev, Igor V., Stajich, Jason E., Spatafora, Joseph W.
Publicado 2020

Microbe-ID: an open source toolbox for microbial genotyping and species identification

por Tabima, Javier F., Everhart, Sydney E., Larsen, Meredith M., Weisberg, Alexandra J., Kamvar, Zhian N., Tancos, Matthew A., Smart, Christine D., Chang, Jeff H., Grünwald, Niklaus J.
Publicado 2016

The type VI secretion system of Xanthomonas phaseoli pv. manihotis is involved in virulence and in vitro motility

por Montenegro Benavides, Nathaly Andrea, Alvarez B., Alejandro, Arrieta-Ortiz, Mario L., Rodriguez-R, Luis Miguel, Botero, David, Tabima, Javier Felipe, Castiblanco, Luisa, Trujillo, Cesar, Restrepo, Silvia, Bernal, Adriana
Publicado 2021

Tolypocladamide H and the Proposed Tolypocladamide NRPS in Tolypocladium Species

por Tehan, Richard M., Blount, Rheannon R., Goold, Ryan L., Mattos, Daphne R., Spatafora, Nicolas R., Tabima, Javier F., Gazis, Romina, Wang, Chengshu, Ishmael, Jane E., Spatafora, Joseph W., McPhail, Kerry L.
Publicado 2022

Annotation of a hybrid partial genome of the coffee rust (Hemileia vastatrix) contributes to the gene repertoire catalog of the Pucciniales

por Cristancho, Marco A., Botero-Rozo, David Octavio, Giraldo, William, Tabima, Javier, Riaño-Pachón, Diego Mauricio, Escobar, Carolina, Rozo, Yomara, Rivera, Luis F., Durán, Andrés, Restrepo, Silvia, Eilam, Tamar, Anikster, Yehoshua, Gaitán, Alvaro L.
Publicado 2014

Genomic Investigation of the Strawberry Pathogen Phytophthora fragariae Indicates Pathogenicity Is Associated With Transcriptional Variation in Three Key Races

por Adams, Thomas M., Armitage, Andrew D., Sobczyk, Maria K., Bates, Helen J., Tabima, Javier F., Kronmiller, Brent A., Tyler, Brett M., Grünwald, Niklaus J., Dunwell, Jim M., Nellist, Charlotte F., Harrison, Richard J.
Publicado 2020

Mitotic Recombination and Rapid Genome Evolution in the Invasive Forest Pathogen Phytophthora ramorum

por Dale, Angela L., Feau, Nicolas, Everhart, Sydney E., Dhillon, Braham, Wong, Barbara, Sheppard, Julie, Bilodeau, Guillaume J., Brar, Avneet, Tabima, Javier F., Shen, Danyu, Brasier, Clive M., Tyler, Brett M., Grünwald, Niklaus J., Hamelin, Richard C.
Publicado 2019

Evolution of the U.S. Biological Select Agent Rathayibacter toxicus

por Davis, Edward W., Tabima, Javier F., Weisberg, Alexandra J., Lopes, Lucas Dantas, Wiseman, Michele S., Wiseman, Michael S., Pupko, Tal, Belcher, Michael S., Sechler, Aaron J., Tancos, Matt A., Schroeder, Brenda K., Murray, Timothy D., Luster, Douglas G., Schneider, William L., Rogers, Elizabeth E., Andreote, Fernando D., Grünwald, Niklaus J., Putnam, Melodie L., Chang, Jeff H.
Publicado 2018

Genomic Survey of Pathogenicity Determinants and VNTR Markers in the Cassava Bacterial Pathogen Xanthomonas axonopodis pv. Manihotis Strain CIO151

por Arrieta-Ortiz, Mario L., Rodríguez-R, Luis M., Pérez-Quintero, Álvaro L., Poulin, Lucie, Díaz, Ana C., Arias Rojas, Nathalia, Trujillo, Cesar, Restrepo Benavides, Mariana, Bart, Rebecca, Boch, Jens, Boureau, Tristan, Darrasse, Armelle, David, Perrine, Dugé de Bernonville, Thomas, Fontanilla, Paula, Gagnevin, Lionel, Guérin, Fabien, Jacques, Marie-Agnès, Lauber, Emmanuelle, Lefeuvre, Pierre, Medina, Cesar, Medina, Edgar, Montenegro, Nathaly, Muñoz Bodnar, Alejandra, Noël, Laurent D., Ortiz Quiñones, Juan F., Osorio, Daniela, Pardo, Carolina, Patil, Prabhu B., Poussier, Stéphane, Pruvost, Olivier, Robène-Soustrade, Isabelle, Ryan, Robert P., Tabima, Javier, Urrego Morales, Oscar G., Vernière, Christian, Carrere, Sébastien, Verdier, Valérie, Szurek, Boris, Restrepo, Silvia, López, Camilo, Koebnik, Ralf, Bernal, Adriana
Publicado 2013