Scedar: A scalable Python package for single-cell RNA-seq exploratory data analysis

por Zhang, Yuanchao, Kim, Man S., Reichenberger, Erin R., Stear, Ben, Taylor, Deanne M.
Publicado 2020

Gonadotropin-Releasing Hormone Agonists Sensitize, and Resensitize, Prostate Cancer Cells to Docetaxel in a p53-Dependent Manner

por Moretti, Roberta M., Marelli, Marina Montagnani, Taylor, Deanne M., Martini, Paolo G. V., Marzagalli, Monica, Limonta, Patrizia
Publicado 2014

Regulatory T cell adoptive transfer alters uterine immune populations, increasing a novel MHC-II(low) macrophage associated with healthy pregnancy

por Lewis, Emma L., Reichenberger, Erin R., Anton, Lauren, Gonzalez, Michael V., Taylor, Deanne M., Porrett, Paige M., Elovitz, Michal A.
Publicado 2023

Gene-Interaction-Sensitive enrichment analysis in congenital heart disease

por Woodward, Alexa A., Taylor, Deanne M., Goldmuntz, Elizabeth, Mitchell, Laura E., Agopian, A.J., Moore, Jason H., Urbanowicz, Ryan J.
Publicado 2022

A transcriptome-based classifier to determine molecular subtypes in medulloblastoma

por Rathi, Komal S., Arif, Sherjeel, Koptyra, Mateusz, Naqvi, Ammar S., Taylor, Deanne M., Storm, Phillip B., Resnick, Adam C., Rokita, Jo Lynne, Raman, Pichai
Publicado 2020

Derivation of a metabolic signature associated with bacterial meningitis in infants

por Gordon, Scott M., Srinivasan, Lakshmi, Taylor, Deanne M., Master, Stephen R., Tremoglie, Marissa A., Hankeova, Adriana, Flannery, Dustin D., Abbasi, Soraya, Fitzgerald, Julie C., Harris, Mary C.
Publicado 2020

Common Variation in Cytoskeletal Genes Is Associated with Conotruncal Heart Defects

por Musfee, Fadi I., Agopian, A. J., Goldmuntz, Elizabeth, Hakonarson, Hakon, Morrow, Bernice E., Taylor, Deanne M., Tristani-Firouzi, Martin, Watkins, W. Scott, Yandell, Mark, Mitchell, Laura E.
Publicado 2021

PTEN‐induced kinase 1 is associated with renal aging, via the cGAS‐STING pathway

por Ha, Min Heui, Kim, Man S., An, Hyun‐Ju, Sung, Min‐Ji, Lee, Yu Ho, Yang, Dong‐Ho, Jung, Sang Hyun, Baek, Jihyun, Choi, Yueun, Taylor, Deanne M., Zhang, Yuanchao, Lee, So‐Young, Jeong, Hye Yun
Publicado 2023

Betacoronavirus-specific alternate splicing

por Karlebach, Guy, Aronow, Bruce, Baylin, Stephen B., Butler, Daniel, Foox, Jonathan, Levy, Shawn, Meydan, Cem, Mozsary, Christopher, Saravia-Butler, Amanda M, Taylor, Deanne M, Wurtele, Eve, Mason, Christopher E, Beheshti, Afshin, Robinson, Peter N
Publicado 2021

Betacoronavirus-specific alternate splicing

por Karlebach, Guy, Aronow, Bruce, Baylin, Stephen B., Butler, Daniel, Foox, Jonathan, Levy, Shawn, Meydan, Cem, Mozsary, Christopher, Saravia-Butler, Amanda M., Taylor, Deanne M., Wurtele, Eve, Mason, Christopher E., Beheshti, Afshin, Robinson, Peter N.
Publicado 2022

Genome-Wide Association Studies of Conotruncal Heart Defects with Normally Related Great Vessels in the United States

por Oluwafemi, Omobola O., Musfee, Fadi I., Mitchell, Laura E., Goldmuntz, Elizabeth, Xie, Hongbo M., Hakonarson, Hakon, Morrow, Bernice E., Guo, Tingwei, Taylor, Deanne M., McDonald-McGinn, Donna M., Emanuel, Beverly S., Agopian, A. J.
Publicado 2021

EPID-14. GABRIELLA MILLER KIDS FIRST DATA RESOURCE CENTER: COLLABORATIVE PLATFORMS FOR ACCELERATING RESEARCH IN PEDIATRIC CANCERS & STRUCTURAL BIRTH DEFECTS

por Heath, Allison P, Zhu, Yuankun, Mattioni, Michele, Farrow, Bailey, Lilly, Jena, Guo, Yiran, Rokita, Jo Lynne, Storm, Phillip B, Volchenboum, Samuel L, Nazarian, Javad, Vasilevsky, Nicole, DiGiovanna, Jack, Haendel, Melissa, Grossman, Robert L, Davis-Dusenbery, Brandi, Taylor, Deanne M, Ferretti, Vincent, Resnick, Adam
Publicado 2020

A New Era for Space Life Science: International Standards for Space Omics Processing

por Rutter, Lindsay, Barker, Richard, Bezdan, Daniela, Cope, Henry, Costes, Sylvain V., Degoricija, Lovorka, Fisch, Kathleen M., Gabitto, Mariano I., Gebre, Samrawit, Giacomello, Stefania, Gilroy, Simon, Green, Stefan J., Mason, Christopher E., Reinsch, Sigrid S., Szewczyk, Nathaniel J., Taylor, Deanne M., Galazka, Jonathan M., Herranz, Raul, Muratani, Masafumi
Publicado 2020

Modulation of CD22 Protein Expression in Childhood Leukemia by Pervasive Splicing Aberrations: Implications for CD22-Directed Immunotherapies

por Zheng, Sisi, Gillespie, Elisabeth, Naqvi, Ammar S., Hayer, Katharina E., Ang, Zhiwei, Torres-Diz, Manuel, Quesnel-Vallières, Mathieu, Hottman, David A., Bagashev, Asen, Chukinas, John, Schmidt, Carolin, Asnani, Mukta, Shraim, Rawan, Taylor, Deanne M., Rheingold, Susan R., O'Brien, Maureen M., Singh, Nathan, Lynch, Kristen W., Ruella, Marco, Barash, Yoseph, Tasian, Sarah K., Thomas-Tikhonenko, Andrei
Publicado 2022

Hospitalizations Associated With Mental Health Conditions Among Adolescents in the US and France During the COVID-19 Pandemic

por Gutiérrez-Sacristán, Alba, Serret-Larmande, Arnaud, Hutch, Meghan R., Sáez, Carlos, Aronow, Bruce J., Bhatnagar, Surbhi, Bonzel, Clara-Lea, Cai, Tianxi, Devkota, Batsal, Hanauer, David A., Loh, Ne Hooi Will, Luo, Yuan, Moal, Bertrand, Ahooyi, Taha Mohseni, Njoroge, Wanjikũ F. M., Omenn, Gilbert S., Sanchez-Pinto, L. Nelson, South, Andrew M., Sperotto, Francesca, Tan, Amelia L. M., Taylor, Deanne M., Verdy, Guillaume, Visweswaran, Shyam, Xia, Zongqi, Zahner, Janet, Avillach, Paul, Bourgeois, Florence T.
Publicado 2022

The Genomics Research and Innovation Network: creating an interoperable, federated, genomics learning system

por Mandl, Kenneth D., Glauser, Tracy, Krantz, Ian D., Avillach, Paul, Bartels, Anna, Beggs, Alan H., Biswas, Sawona, Bourgeois, Florence T., Corsmo, Jeremy, Dauber, Andrew, Devkota, Batsal, Fleisher, Gary R., Heath, Allison P., Helbig, Ingo, Hirschhorn, Joel N., Kilbourn, Judson, Kong, Sek Won, Kornetsky, Susan, Majzoub, Joseph A., Marsolo, Keith, Martin, Lisa J., Nix, Jeremy, Schwarzhoff, Amy, Stedman, Jason, Strauss, Arnold, Sund, Kristen L., Taylor, Deanne M., White, Peter S., Marsh, Eric, Grimberg, Adda, Hawkes, Colin
Publicado 2019

Correction: The Genomics Research and Innovation Network: creating an interoperable, federated, genomics learning system

por Mandl, Kenneth D., Glauser, Tracy, Krantz, Ian D., Avillach, Paul, Bartels, Anna, Beggs, Alan H., Biswas, Sawona, Bourgeois, Florence T., Corsmo, Jeremy, Dauber, Andrew, Devkota, Batsal, Fleisher, Gary R., Heath, Allison P., Helbig, Ingo, Hirschhorn, Joel N., Kilbourn, Judson, Kong, Sek Won, Kornetsky, Susan, Majzoub, Joseph A., Marsolo, Keith, Martin, Lisa J., Nix, Jeremy, Schwarzhoff, Amy, Stedman, Jason, Strauss, Arnold, Sund, Kristen L., Taylor, Deanne M., White, Peter S., Marsh, Eric, Grimberg, Adda, Hawkes, Colin
Publicado 2019

Clinical phenotypes and outcomes in children with multisystem inflammatory syndrome across SARS-CoV-2 variant eras: a multinational study from the 4CE consortium

por Sperotto, Francesca, Gutiérrez-Sacristán, Alba, Makwana, Simran, Li, Xiudi, Rofeberg, Valerie N., Cai, Tianxi, Bourgeois, Florence T., Omenn, Gilbert S., Hanauer, David A., Sáez, Carlos, Bonzel, Clara-Lea, Bucholz, Emily, Dionne, Audrey, Elias, Matthew D., García-Barrio, Noelia, González, Tomás González, Issitt, Richard W., Kernan, Kate F., Laird-Gion, Jessica, Maidlow, Sarah E., Mandl, Kenneth D., Ahooyi, Taha Mohseni, Moraleda, Cinta, Morris, Michele, Moshal, Karyn L., Pedrera-Jiménez, Miguel, Shah, Mohsin A., South, Andrew M., Spiridou, Anastasia, Taylor, Deanne M., Verdy, Guillaume, Visweswaran, Shyam, Wang, Xuan, Xia, Zongqi, Zachariasse, Joany M., Newburger, Jane W., Avillach, Paul
Publicado 2023

What Every Reader Should Know About Studies Using Electronic Health Record Data but May Be Afraid to Ask

por Kohane, Isaac S, Aronow, Bruce J, Avillach, Paul, Beaulieu-Jones, Brett K, Bellazzi, Riccardo, Bradford, Robert L, Brat, Gabriel A, Cannataro, Mario, Cimino, James J, García-Barrio, Noelia, Gehlenborg, Nils, Ghassemi, Marzyeh, Gutiérrez-Sacristán, Alba, Hanauer, David A, Holmes, John H, Hong, Chuan, Klann, Jeffrey G, Loh, Ne Hooi Will, Luo, Yuan, Mandl, Kenneth D, Daniar, Mohamad, Moore, Jason H, Murphy, Shawn N, Neuraz, Antoine, Ngiam, Kee Yuan, Omenn, Gilbert S, Palmer, Nathan, Patel, Lav P, Pedrera-Jiménez, Miguel, Sliz, Piotr, South, Andrew M, Tan, Amelia Li Min, Taylor, Deanne M, Taylor, Bradley W, Torti, Carlo, Vallejos, Andrew K, Wagholikar, Kavishwar B, Weber, Griffin M, Cai, Tianxi
Publicado 2021

International Analysis of Electronic Health Records of Children and Youth Hospitalized With COVID-19 Infection in 6 Countries

por Bourgeois, Florence T., Gutiérrez-Sacristán, Alba, Keller, Mark S., Liu, Molei, Hong, Chuan, Bonzel, Clara-Lea, Tan, Amelia L. M., Aronow, Bruce J., Boeker, Martin, Booth, John, Cruz Rojo, Jaime, Devkota, Batsal, García Barrio, Noelia, Gehlenborg, Nils, Geva, Alon, Hanauer, David A., Hutch, Meghan R., Issitt, Richard W., Klann, Jeffrey G., Luo, Yuan, Mandl, Kenneth D., Mao, Chengsheng, Moal, Bertrand, Moshal, Karyn L., Murphy, Shawn N., Neuraz, Antoine, Ngiam, Kee Yuan, Omenn, Gilbert S, Patel, Lav P., Jiménez, Miguel Pedrera, Sebire, Neil J., Balazote, Pablo Serrano, Serret-Larmande, Arnaud, South, Andrew M., Spiridou, Anastasia, Taylor, Deanne M., Tippmann, Patric, Visweswaran, Shyam, Weber, Griffin M., Kohane, Isaac S., Cai, Tianxi, Avillach, Paul
Publicado 2021