Introducing the PRIDE Archive RESTful web services

por Reisinger, Florian, del-Toro, Noemi, Ternent, Tobias, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2015

OLS Client and OLS Dialog: Open Source Tools to Annotate Public Omics Datasets

por Perez‐Riverol, Yasset, Ternent, Tobias, Koch, Maximilian, Barsnes, Harald, Vrousgou, Olga, Jupp, Simon, Vizcaíno, Juan Antonio
Publicado 2017

ms-data-core-api: an open-source, metadata-oriented library for computational proteomics

por Perez-Riverol, Yasset, Uszkoreit, Julian, Sanchez, Aniel, Ternent, Tobias, del Toro, Noemi, Hermjakob, Henning, Vizcaíno, Juan Antonio, Wang, Rui
Publicado 2015

The proBAM and proBed standard formats: enabling a seamless integration of genomics and proteomics data

por Menschaert, Gerben, Wang, Xiaojing, Jones, Andrew R., Ghali, Fawaz, Fenyö, David, Olexiouk, Volodimir, Zhang, Bing, Deutsch, Eric W., Ternent, Tobias, Vizcaíno, Juan Antonio
Publicado 2018

2016 update of the PRIDE database and its related tools

por Vizcaíno, Juan Antonio, Csordas, Attila, del-Toro, Noemi, Dianes, José A., Griss, Johannes, Lavidas, Ilias, Mayer, Gerhard, Perez-Riverol, Yasset, Reisinger, Florian, Ternent, Tobias, Xu, Qing-Wei, Wang, Rui, Hermjakob, Henning
Publicado 2016

2016 update of the PRIDE database and its related tools

por Vizcaíno, Juan Antonio, Csordas, Attila, del-Toro, Noemi, Dianes, José A., Griss, Johannes, Lavidas, Ilias, Mayer, Gerhard, Perez-Riverol, Yasset, Reisinger, Florian, Ternent, Tobias, Xu, Qing-Wei, Wang, Rui, Hermjakob, Henning
Publicado 2016

PRIDE Inspector Toolsuite: Moving Toward a Universal Visualization Tool for Proteomics Data Standard Formats and Quality Assessment of ProteomeXchange Datasets

por Perez-Riverol, Yasset, Xu, Qing-Wei, Wang, Rui, Uszkoreit, Julian, Griss, Johannes, Sanchez, Aniel, Reisinger, Florian, Csordas, Attila, Ternent, Tobias, del-Toro, Noemi, Dianes, Jose A., Eisenacher, Martin, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2016

Ten Simple Rules for Taking Advantage of Git and GitHub

por Perez-Riverol, Yasset, Gatto, Laurent, Wang, Rui, Sachsenberg, Timo, Uszkoreit, Julian, Leprevost, Felipe da Veiga, Fufezan, Christian, Ternent, Tobias, Eglen, Stephen J., Katz, Daniel S., Pollard, Tom J., Konovalov, Alexander, Flight, Robert M., Blin, Kai, Vizcaíno, Juan Antonio
Publicado 2016

The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition

por Deutsch, Eric W., Csordas, Attila, Sun, Zhi, Jarnuczak, Andrew, Perez-Riverol, Yasset, Ternent, Tobias, Campbell, David S., Bernal-Llinares, Manuel, Okuda, Shujiro, Kawano, Shin, Moritz, Robert L., Carver, Jeremy J., Wang, Mingxun, Ishihama, Yasushi, Bandeira, Nuno, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2017

The mzIdentML Data Standard Version 1.2, Supporting Advances in Proteome Informatics

por Vizcaíno, Juan Antonio, Mayer, Gerhard, Perkins, Simon, Barsnes, Harald, Vaudel, Marc, Perez-Riverol, Yasset, Ternent, Tobias, Uszkoreit, Julian, Eisenacher, Martin, Fischer, Lutz, Rappsilber, Juri, Netz, Eugen, Walzer, Mathias, Kohlbacher, Oliver, Leitner, Alexander, Chalkley, Robert J., Ghali, Fawaz, Martínez-Bartolomé, Salvador, Deutsch, Eric W., Jones, Andrew R.
Publicado 2017

The PRIDE database and related tools and resources in 2019: improving support for quantification data

por Perez-Riverol, Yasset, Csordas, Attila, Bai, Jingwen, Bernal-Llinares, Manuel, Hewapathirana, Suresh, Kundu, Deepti J, Inuganti, Avinash, Griss, Johannes, Mayer, Gerhard, Eisenacher, Martin, Pérez, Enrique, Uszkoreit, Julian, Pfeuffer, Julianus, Sachsenberg, Timo, Yılmaz, Şule, Tiwary, Shivani, Cox, Jürgen, Audain, Enrique, Walzer, Mathias, Jarnuczak, Andrew F, Ternent, Tobias, Brazma, Alvis, Vizcaíno, Juan Antonio
Publicado 2019

ArrayExpress update—trends in database growth and links to data analysis tools

por Rustici, Gabriella, Kolesnikov, Nikolay, Brandizi, Marco, Burdett, Tony, Dylag, Miroslaw, Emam, Ibrahim, Farne, Anna, Hastings, Emma, Ison, Jon, Keays, Maria, Kurbatova, Natalja, Malone, James, Mani, Roby, Mupo, Annalisa, Pedro Pereira, Rui, Pilicheva, Ekaterina, Rung, Johan, Sharma, Anjan, Tang, Y. Amy, Ternent, Tobias, Tikhonov, Andrew, Welter, Danielle, Williams, Eleanor, Brazma, Alvis, Parkinson, Helen, Sarkans, Ugis
Publicado 2013