Profiling the quantitative occupancy of myriad transcription factors across conditions by modeling chromatin accessibility data

por Luo, Kaixuan, Zhong, Jianling, Safi, Alexias, Hong, Linda K., Tewari, Alok K., Song, Lingyun, Reddy, Timothy E., Ma, Li, Crawford, Gregory E., Hartemink, Alexander J.
Publicado 2022

Chromatin accessibility reveals insights into androgen receptor activation and transcriptional specificity

por Tewari, Alok K, Yardimci, Galip Gürkan, Shibata, Yoichiro, Sheffield, Nathan C, Song, Lingyun, Taylor, Barry S, Georgiev, Stoyan G, Coetzee, Gerhard A, Ohler, Uwe, Furey, Terrence S, Crawford, Gregory E, Febbo, Phillip G
Publicado 2012

Extensive Evolutionary Changes in Regulatory Element Activity during Human Origins Are Associated with Altered Gene Expression and Positive Selection

por Shibata, Yoichiro, Sheffield, Nathan C., Fedrigo, Olivier, Babbitt, Courtney C., Wortham, Matthew, Tewari, Alok K., London, Darin, Song, Lingyun, Lee, Bum-Kyu, Iyer, Vishwanath R., Parker, Stephen C. J., Margulies, Elliott H., Wray, Gregory A., Furey, Terrence S., Crawford, Gregory E.
Publicado 2012

Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma

por Bi, Kevin, He, Meng Xiao, Bakouny, Ziad, Kanodia, Abhay, Napolitano, Sara, Wu, Jingyi, Grimaldi, Grace, Braun, David A., Cuoco, Michael S., Mayorga, Angie, DelloStritto, Laura, Bouchard, Gabrielle, Steinharter, John, Tewari, Alok K., Vokes, Natalie I., Shannon, Erin, Sun, Maxine, Park, Jihye, Chang, Steven L., McGregor, Bradley A., Haq, Rizwan, Denize, Thomas, Signoretti, Sabina, Guerriero, Jennifer L., Vigneau, Sébastien, Rozenblatt-Rosen, Orit, Rotem, Asaf, Regev, Aviv, Choueiri, Toni K., Van Allen, Eliezer M.
Publicado 2021

A patient-driven clinicogenomic partnership for metastatic prostate cancer

por Crowdis, Jett, Balch, Sara, Sterlin, Lauren, Thomas, Beena S., Camp, Sabrina Y., Dunphy, Michael, Anastasio, Elana, Shah, Shahrayz, Damon, Alyssa L., Ramos, Rafael, Sosa, Delia M., Small, Ilan K., Tomson, Brett N., Nguyen, Colleen M., McGillicuddy, Mary, Chastain, Parker S., He, Meng Xiao, Cheung, Alexander T.M., Wankowicz, Stephanie, Tewari, Alok K., Kim, Dewey, AlDubayan, Saud H., Dowdye, Ayanah, Zola, Benjamin, Nowak, Joel, Manarite, Jan, Gunn, Idola Henry, Olson, Bryce, Lander, Eric S., Painter, Corrie A., Wagle, Nikhil, Van Allen, Eliezer M.
Publicado 2022

Transcriptional mediators of treatment resistance in lethal prostate cancer

por He, Meng Xiao, Cuoco, Michael S., Crowdis, Jett, Bosma-Moody, Alice, Zhang, Zhenwei, Bi, Kevin, Kanodia, Abhay, Su, Mei-Ju, Ku, Sheng-Yu, Garcia, Maria Mica, Sweet, Amalia R., Rodman, Christopher, DelloStritto, Laura, Silver, Rebecca, Steinharter, John, Shah, Parin, Izar, Benjamin, Walk, Nathan C., Burke, Kelly P., Bakouny, Ziad, Tewari, Alok K., Liu, David, Camp, Sabrina Y., Vokes, Natalie I., Salari, Keyan, Park, Jihye, Vigneau, Sébastien, Fong, Lawrence, Russo, Joshua W., Yuan, Xin, Balk, Steven P., Beltran, Himisha, Rozenblatt-Rosen, Orit, Regev, Aviv, Rotem, Asaf, Taplin, Mary-Ellen, Van Allen, Eliezer M.
Publicado 2021

Subtype heterogeneity and epigenetic convergence in neuroendocrine prostate cancer

por Cejas, Paloma, Xie, Yingtian, Font-Tello, Alba, Lim, Klothilda, Syamala, Sudeepa, Qiu, Xintao, Tewari, Alok K., Shah, Neel, Nguyen, Holly M., Patel, Radhika A., Brown, Lisha, Coleman, Ilsa, Hackeng, Wenzel M., Brosens, Lodewijk, Dreijerink, Koen M. A., Ellis, Leigh, Alaiwi, Sarah Abou, Seo, Ji-Heui, Baca, Sylvan, Beltran, Himisha, Khani, Francesca, Pomerantz, Mark, Dall’Agnese, Alessandra, Crowdis, Jett, Van Allen, Eliezer M., Bellmunt, Joaquim, Morrisey, Colm, Nelson, Peter S., DeCaprio, James, Farago, Anna, Dyson, Nicholas, Drapkin, Benjamin, Liu, X. Shirley, Freedman, Matthew, Haffner, Michael C., Corey, Eva, Brown, Myles, Long, Henry W.
Publicado 2021