The Role of Actin in Spindle Orientation Changes during the Saccharomyces cerevisiae Cell Cycle

por Theesfeld, Chandra L., Irazoqui, Javier E., Bloom, Kerry, Lew, Daniel J.
Publicado 1999

Atlas of primary cell-type-specific sequence models of gene expression and variant effects

por Sokolova, Ksenia, Theesfeld, Chandra L., Wong, Aaron K., Zhang, Zijun, Dolinski, Kara, Troyanskaya, Olga G.
Publicado 2023

Deep learning sequence-based ab initio prediction of variant effects on expression and disease risk

por Zhou, Jian, Theesfeld, Chandra L., Yao, Kevin, Chen, Kathleen M., Wong, Aaron K., Troyanskaya, Olga G.
Publicado 2018

Discovery of biological networks from diverse functional genomic data

por Myers, Chad L, Robson, Drew, Wible, Adam, Hibbs, Matthew A, Chiriac, Camelia, Theesfeld, Chandra L, Dolinski, Kara, Troyanskaya, Olga G
Publicado 2005

Genome-wide landscape of RNA-binding protein target site dysregulation reveals a major impact on psychiatric disorder risk

por Park, Christopher Y., Zhou, Jian, Wong, Aaron K., Chen, Kathleen M., Theesfeld, Chandra L., Darnell, Robert B., Troyanskaya, Olga G.
Publicado 2021

Modeling transcriptional regulation of model species with deep learning

por Cofer, Evan M., Raimundo, João, Tadych, Alicja, Yamazaki, Yuji, Wong, Aaron K., Theesfeld, Chandra L., Levine, Michael S., Troyanskaya, Olga G.
Publicado 2021

Accurate genome-wide predictions of spatio-temporal gene expression during embryonic development

por Zhou, Jian, Schor, Ignacio E., Yao, Victoria, Theesfeld, Chandra L., Marco-Ferreres, Raquel, Tadych, Alicja, Furlong, Eileen E. M., Troyanskaya, Olga G.
Publicado 2019

The BioGRID interaction database: 2017 update

por Chatr-aryamontri, Andrew, Oughtred, Rose, Boucher, Lorrie, Rust, Jennifer, Chang, Christie, Kolas, Nadine K., O'Donnell, Lara, Oster, Sara, Theesfeld, Chandra, Sellam, Adnane, Stark, Chris, Breitkreutz, Bobby-Joe, Dolinski, Kara, Tyers, Mike
Publicado 2017

Specific viral RNA drives the SARS CoV-2 nucleocapsid to phase separate

por Iserman, Christiane, Roden, Christine, Boerneke, Mark, Sealfon, Rachel, McLaughlin, Grace, Jungreis, Irwin, Park, Chris, Boppana, Avinash, Fritch, Ethan, Hou, Yixuan J., Theesfeld, Chandra, Troyanskaya, Olga G, Baric, Ralph S., Sheahan, Timothy P., Weeks, Kevin, Gladfelter, Amy S.
Publicado 2020

Modeling molecular development of breast cancer in canine mammary tumors

por Graim, Kiley, Gorenshteyn, Dmitriy, Robinson, David G., Carriero, Nicholas J., Cahill, James A., Chakrabarti, Rumela, Goldschmidt, Michael H., Durham, Amy C., Funk, Julien, Storey, John D., Kristensen, Vessela N., Theesfeld, Chandra L., Sorenmo, Karin U., Troyanskaya, Olga G.
Publicado 2021

An extended set of yeast-based functional assays accurately identifies human disease mutations

por Sun, Song, Yang, Fan, Tan, Guihong, Costanzo, Michael, Oughtred, Rose, Hirschman, Jodi, Theesfeld, Chandra L., Bansal, Pritpal, Sahni, Nidhi, Yi, Song, Yu, Analyn, Tyagi, Tanya, Tie, Cathy, Hill, David E., Vidal, Marc, Andrews, Brenda J., Boone, Charles, Dolinski, Kara, Roth, Frederick P.
Publicado 2016

The BioGRID interaction database: 2015 update

por Chatr-aryamontri, Andrew, Breitkreutz, Bobby-Joe, Oughtred, Rose, Boucher, Lorrie, Heinicke, Sven, Chen, Daici, Stark, Chris, Breitkreutz, Ashton, Kolas, Nadine, O'Donnell, Lara, Reguly, Teresa, Nixon, Julie, Ramage, Lindsay, Winter, Andrew, Sellam, Adnane, Chang, Christie, Hirschman, Jodi, Theesfeld, Chandra, Rust, Jennifer, Livstone, Michael S., Dolinski, Kara, Tyers, Mike
Publicado 2014

Genomic RNA Elements Drive Phase Separation of the SARS-CoV-2 Nucleocapsid

por Iserman, Christiane, Roden, Christine A., Boerneke, Mark A., Sealfon, Rachel S.G., McLaughlin, Grace A., Jungreis, Irwin, Fritch, Ethan J., Hou, Yixuan J., Ekena, Joanne, Weidmann, Chase A., Theesfeld, Chandra L., Kellis, Manolis, Troyanskaya, Olga G., Baric, Ralph S., Sheahan, Timothy P., Weeks, Kevin M., Gladfelter, Amy S.
Publicado 2020

Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD)

por Balakrishnan, Rama, Christie, Karen R., Costanzo, Maria C., Dolinski, Kara, Dwight, Selina S., Engel, Stacia R., Fisk, Dianna G., Hirschman, Jodi E., Hong, Eurie L., Nash, Robert, Oughtred, Rose, Skrzypek, Marek, Theesfeld, Chandra L., Binkley, Gail, Dong, Qing, Lane, Christopher, Sethuraman, Anand, Weng, Shuai, Botstein, David, Cherry, J. Michael
Publicado 2005

Expanded protein information at SGD: new pages and proteome browser

por Nash, Robert, Weng, Shuai, Hitz, Ben, Balakrishnan, Rama, Christie, Karen R., Costanzo, Maria C., Dwight, Selina S., Engel, Stacia R., Fisk, Dianna G., Hirschman, Jodi E., Hong, Eurie L., Livstone, Michael S., Oughtred, Rose, Park, Julie, Skrzypek, Marek, Theesfeld, Chandra L., Binkley, Gail, Dong, Qing, Lane, Christopher, Miyasato, Stuart, Sethuraman, Anand, Schroeder, Mark, Dolinski, Kara, Botstein, David, Cherry, J. Michael
Publicado 2007

Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome

por Hirschman, Jodi E., Balakrishnan, Rama, Christie, Karen R., Costanzo, Maria C., Dwight, Selina S., Engel, Stacia R., Fisk, Dianna G., Hong, Eurie L., Livstone, Michael S., Nash, Robert, Park, Julie, Oughtred, Rose, Skrzypek, Marek, Starr, Barry, Theesfeld, Chandra L., Williams, Jennifer, Andrada, Rey, Binkley, Gail, Dong, Qing, Lane, Christopher, Miyasato, Stuart, Sethuraman, Anand, Schroeder, Mark, Thanawala, Mayank K., Weng, Shuai, Dolinski, Kara, Botstein, David, Cherry, J. Michael
Publicado 2006

Mapping disease regulatory circuits at cell-type resolution from single-cell multiomics data

por Chen, Xi, Wang, Yuan, Cappuccio, Antonio, Cheng, Wan-Sze, Zamojski, Frederique Ruf, Nair, Venugopalan D., Miller, Clare M., Rubenstein, Aliza B., Nudelman, German, Tadych, Alicja, Theesfeld, Chandra L., Vornholt, Alexandria, George, Mary-Catherine, Ruffin, Felicia, Dagher, Michael, Chawla, Daniel G., Soares-Schanoski, Alessandra, Spurbeck, Rachel R., Ndhlovu, Lishomwa C., Sebra, Robert, Kleinstein, Steven H., Letizia, Andrew G., Ramos, Irene, Fowler, Vance G., Woods, Christopher W., Zaslavsky, Elena, Troyanskaya, Olga G., Sealfon, Stuart C.
Publicado 2023

SARS-CoV-2 receptor networks in diabetic and COVID-19–associated kidney disease

por Menon, Rajasree, Otto, Edgar A., Sealfon, Rachel, Nair, Viji, Wong, Aaron K., Theesfeld, Chandra L., Chen, Xi, Wang, Yuan, Boppana, Avinash S., Luo, Jinghui, Yang, Yingbao, Kasson, Peter M., Schaub, Jennifer A., Berthier, Celine C., Eddy, Sean, Lienczewski, Chrysta C., Godfrey, Bradley, Dagenais, Susan L., Sohaney, Ryann, Hartman, John, Fermin, Damian, Subramanian, Lalita, Looker, Helen C., Harder, Jennifer L., Mariani, Laura H., Hodgin, Jeffrey B., Sexton, Jonathan Z., Wobus, Christiane E., Naik, Abhijit S., Nelson, Robert G., Troyanskaya, Olga G., Kretzler, Matthias
Publicado 2020