Prioritization of COVID-19 risk factors in July 2020 and February 2021 in the UK

por Tangirala, Sivateja, Tierney, Braden T., Patel, Chirag J.
Publicado 2023

Quantifying Shared and Unique Gene Content across 17 Microbial Ecosystems

por Zimmerman, Samuel, Tierney, Braden T., Patel, Chirag J., Kostic, Aleksandar D.
Publicado 2023

Gene-level metagenomic architectures across diseases yield high-resolution microbiome diagnostic indicators

por Tierney, Braden T., Tan, Yingxuan, Kostic, Aleksandar D., Patel, Chirag J.
Publicado 2021

Using Cartesian Doubt To Build a Sequencing-Based View of Microbiology

por Tierney, Braden T., Szymanski, Erika, Henriksen, James R., Kostic, Aleksandar D., Patel, Chirag J.
Publicado 2021

Aether: leveraging linear programming for optimal cloud computing in genomics

por Luber, Jacob M, Tierney, Braden T, Cofer, Evan M, Patel, Chirag J, Kostic, Aleksandar D
Publicado 2018

Reproducible and opposing gut microbiome signatures distinguish autoimmune diseases and cancers: a systematic review and meta-analysis

por Islam, Md Zohorul, Tran, Melissa, Xu, Tao, Tierney, Braden T., Patel, Chirag, Kostic, Aleksandar David
Publicado 2022

Repurposing large health insurance claims data to estimate genetic and environmental contributions in 560 phenotypes

por Lakhani, Chirag M, Tierney, Braden T, Manrai, Arjun K, Yang, Jian, Visscher, Peter M, Patel, Chirag J
Publicado 2019

The microbial biodiversity at the archeological site of Tel Megiddo (Israel)

por Zhang, Yali, Ruff, S. Emil, Oskolkov, Nikolay, Tierney, Braden T., Ryon, Krista, Danko, David, Mason, Christopher E., Elhaik, Eran
Publicado 2023

A systematic machine learning and data type comparison yields metagenomic predictors of infant age, sex, breastfeeding, antibiotic usage, country of origin, and delivery type

por Le Goallec, Alan, Tierney, Braden T., Luber, Jacob M., Cofer, Evan M., Kostic, Aleksandar D., Patel, Chirag J.
Publicado 2020

Removal of a Membrane Anchor Reveals the Opposing Regulatory Functions of Vibrio cholerae Glucose-Specific Enzyme IIA in Biofilms and the Mammalian Intestine

por Vijayakumar, Vidhya, Vanhove, Audrey S., Pickering, Bradley S., Liao, Julie, Tierney, Braden T., Asara, John M., Bronson, Roderick, Watnick, Paula I.
Publicado 2018

Leveraging vibration of effects analysis for robust discovery in observational biomedical data science

por Tierney, Braden T., Anderson, Elizabeth, Tan, Yingxuan, Claypool, Kajal, Tangirala, Sivateja, Kostic, Aleksandar D., Manrai, Arjun K., Patel, Chirag J.
Publicado 2021

Multidrug-resistant Acinetobacter pittii is adapting to and exhibiting potential succession aboard the International Space Station

por Tierney, Braden T., Singh, Nitin K., Simpson, Anna C., Hujer, Andrea M., Bonomo, Robert A., Mason, Christopher E., Venkateswaran, Kasthuri
Publicado 2022

Systematically assessing microbiome–disease associations identifies drivers of inconsistency in metagenomic research

por Tierney, Braden T., Tan, Yingxuan, Yang, Zhen, Shui, Bing, Walker, Michaela J., Kent, Benjamin M., Kostic, Aleksandar D., Patel, Chirag J.
Publicado 2022

The Maleth program: Malta's first space mission discoveries on the microbiome of diabetic foot ulcers

por Gatt, Christine, Tierney, Braden T., Madrigal, Pedro, Mason, Christopher E., Beheshti, Afshin, Telzerow, Anja, Benes, Vladimir, Zahra, Graziella, Bonett, Jurgen, Cassar, Kevin, Borg, Joseph
Publicado 2022

A modular metagenomics analysis system for integrated multi-step data exploration

por Mak, Lauren, Tierney, Braden, Ronkowski, Cynthia, Toomey, Michael, Martinez, Juan Sebastian Andrade, Zimmerman, Sam, Fu, Chenlian, Kopbayeva, Malika, Noyvert, Anna, Farthing, Brett, Tang, Shuiquan, Mason, Christopher, Hajirasouliha, Iman
Publicado 2023

Supervised Machine Learning Enables Geospatial Microbial Provenance

por Bhattacharya, Chandrima, Tierney, Braden T., Ryon, Krista A., Bhattacharyya, Malay, Hastings, Jaden J. A., Basu, Srijani, Bhattacharya, Bodhisatwa, Bagchi, Debneel, Mukherjee, Somsubhro, Wang, Lu, Henaff, Elizabeth M., Mason, Christopher E.
Publicado 2022

Capacity of a Microbial Synbiotic To Rescue the In Vitro Metabolic Activity of the Gut Microbiome following Perturbation with Alcohol or Antibiotics

por Tierney, Braden T., Van den Abbeele, Pieter, Al-Ghalith, Gabriel A., Verstrepen, Lynn, Ghyselinck, Jonas, Calatayud, Marta, Marzorati, Massimo, Gadir, Azza A., Daisley, Brendan, Reid, Gregor, Bron, Peter A., Gevers, Dirk, Dhir, Raja, Simmons, Sheri L.
Publicado 2023

Microbiome and metagenomic analysis of Lake Hillier Australia reveals pigment-rich polyextremophiles and wide-ranging metabolic adaptations

por Sierra, Maria A., Ryon, Krista A., Tierney, Braden T., Foox, Jonathan, Bhattacharya, Chandrima, Afshin, Evan, Butler, Daniel, Green, Stefan J., Thomas, W. Kelley, Ramsdell, Jordan, Bivens, Nathan J., McGrath, Ken, Mason, Christopher E., Tighe, Scott W.
Publicado 2022

Functional response to a microbial synbiotic in the gastrointestinal system of children: a randomized clinical trial

por Tierney, Braden T., Versalovic, James, Fasano, Alessio, Petrosino, Joseph F., Chumpitazi, Bruno P., Mayer, Emeran A., Boetes, Jared, Smits, Gerard, Parkar, Shanthi G., Voreades, Noah, Kartal, Ece, Al-Ghalith, Gabriel A., Pane, Marco, Bron, Peter A., Reid, Gregor, Dhir, Raja, Mason, Christopher E.
Publicado 2022

Meta’omic analysis of elite athletes identifies a performance-enhancing microbe that functions via lactate metabolism

por Scheiman, Jonathan, Luber, Jacob M., Chavkin, Theodore A., MacDonald, Tara, Tung, Angela, Pham, Loc-Duyen, Wibowo, Marsha C., Wurth, Renee C., Punthambaker, Sukanya, Tierney, Braden T., Yang, Zhen, Hattab, Mohammad W., Avila-Pacheco, Julian, Clish, Clary B., Lessard, Sarah, Church, George M., Kostic, Aleksandar D.
Publicado 2019