How many antiviral small interfering RNAs may be encoded by the mammalian genomes?

por Zabolotneva, Anastasia, Tkachev, Victor, Filatov, Felix, Buzdin, Anton
Publicado 2010

Cancer gene expression profiles associated with clinical outcomes to chemotherapy treatments

por Borisov, Nicolas, Sorokin, Maxim, Tkachev, Victor, Garazha, Andrew, Buzdin, Anton
Publicado 2020

Oxidative Stress and Free-Radical Oxidation in BCG Granulomatosis Development

por Menshchikova, Elena, Zenkov, Nikolay, Tkachev, Victor, Potapova, Oksana, Cherdantseva, Liliya, Shkurupiy, Vyacheslav
Publicado 2013

Flexible Data Trimming Improves Performance of Global Machine Learning Methods in Omics-Based Personalized Oncology

por Tkachev, Victor, Sorokin, Maxim, Borisov, Constantin, Garazha, Andrew, Buzdin, Anton, Borisov, Nicolas
Publicado 2020

FLOating-Window Projective Separator (FloWPS): A Data Trimming Tool for Support Vector Machines (SVM) to Improve Robustness of the Classifier

por Tkachev, Victor, Sorokin, Maxim, Mescheryakov, Artem, Simonov, Alexander, Garazha, Andrew, Buzdin, Anton, Muchnik, Ilya, Borisov, Nicolas
Publicado 2019

Uniformly shaped harmonization combines human transcriptomic data from different platforms while retaining their biological properties and differential gene expression patterns

por Borisov, Nicolas, Tkachev, Victor, Simonov, Alexander, Sorokin, Maxim, Kim, Ella, Kuzmin, Denis, Karademir-Yilmaz, Betul, Buzdin, Anton
Publicado 2023

Shambhala: a platform-agnostic data harmonizer for gene expression data

por Borisov, Nicolas, Shabalina, Irina, Tkachev, Victor, Sorokin, Maxim, Garazha, Andrew, Pulin, Andrey, Eremin, Ilya I., Buzdin, Anton
Publicado 2019

Retroelement-Linked H3K4me1 Histone Tags Uncover Regulatory Evolution Trends of Gene Enhancers and Feature Quickly Evolving Molecular Processes in Human Physiology

por Nikitin, Daniil, Kolosov, Nikita, Murzina, Anastasiia, Pats, Karina, Zamyatin, Anton, Tkachev, Victor, Sorokin, Maxim, Kopylov, Philippe, Buzdin, Anton
Publicado 2019

Profiling of Human Molecular Pathways Affected by Retrotransposons at the Level of Regulation by Transcription Factor Proteins

por Nikitin, Daniil, Penzar, Dmitry, Garazha, Andrew, Sorokin, Maxim, Tkachev, Victor, Borisov, Nicolas, Poltorak, Alexander, Prassolov, Vladimir, Buzdin, Anton A.
Publicado 2018

Retroelement—Linked Transcription Factor Binding Patterns Point to Quickly Developing Molecular Pathways in Human Evolution

por Nikitin, Daniil, Garazha, Andrew, Sorokin, Maxim, Penzar, Dmitry, Tkachev, Victor, Markov, Alexander, Gaifullin, Nurshat, Borger, Pieter, Poltorak, Alexander, Buzdin, Anton
Publicado 2019

Correction: Nikitin, D., et al. Retroelement—Linked Transcription Factor Binding Patterns Point to Quickly Developing Molecular Pathways in Human Evolution. Cells 2019, 8, 130

por Nikitin, Daniil, Garazha, Andrew, Sorokin, Maxim, Penzar, Dmitry, Tkachev, Victor, Markov, Alexander, Gaifullin, Nurshat, Borger, Pieter, Poltorak, Alexander, Buzdin, Anton
Publicado 2019

Better Agreement of Human Transcriptomic and Proteomic Cancer Expression Data at the Molecular Pathway Activation Level

por Raevskiy, Mikhail, Sorokin, Maxim, Zakharova, Galina, Tkachev, Victor, Borisov, Nicolas, Kuzmin, Denis, Kremenchutckaya, Kristina, Gudkov, Alexander, Kamashev, Dmitry, Buzdin, Anton
Publicado 2022

Mutation Enrichment and Transcriptomic Activation Signatures of 419 Molecular Pathways in Cancer

por Zolotovskaia, Marianna A., Tkachev, Victor S., Seryakov, Alexander P., Kuzmin, Denis V., Kamashev, Dmitry E., Sorokin, Maxim I., Roumiantsev, Sergey A., Buzdin, Anton A.
Publicado 2020

RNA sequencing profiles and diagnostic signatures linked with response to ramucirumab in gastric cancer

por Sorokin, Maxim, Poddubskaya, Elena, Baranova, Madina, Glusker, Alex, Kogoniya, Lali, Markarova, Ekaterina, Allina, Daria, Suntsova, Maria, Tkachev, Victor, Garazha, Andrew, Sekacheva, Marina, Buzdin, Anton
Publicado 2020

Algorithmically Reconstructed Molecular Pathways as the New Generation of Prognostic Molecular Biomarkers in Human Solid Cancers

por Zolotovskaia, Marianna, Kovalenko, Maks, Pugacheva, Polina, Tkachev, Victor, Simonov, Alexander, Sorokin, Maxim, Seryakov, Alexander, Garazha, Andrew, Gaifullin, Nurshat, Sekacheva, Marina, Zakharova, Galina, Buzdin, Anton A.
Publicado 2023

H3K4me3, H3K9ac, H3K27ac, H3K27me3 and H3K9me3 Histone Tags Suggest Distinct Regulatory Evolution of Open and Condensed Chromatin Landmarks

por Igolkina, Anna A., Zinkevich, Arsenii, Karandasheva, Kristina O., Popov, Aleksey A., Selifanova, Maria V., Nikolaeva, Daria, Tkachev, Victor, Penzar, Dmitry, Nikitin, Daniil M., Buzdin, Anton
Publicado 2019

Next-Generation Grade and Survival Expression Biomarkers of Human Gliomas Based on Algorithmically Reconstructed Molecular Pathways

por Zolotovskaia, Marianna A., Kovalenko, Max A., Tkachev, Victor S., Simonov, Alexander M., Sorokin, Maxim I., Kim, Ella, Kuzmin, Denis V., Karademir-Yilmaz, Betul, Buzdin, Anton A.
Publicado 2022

Identification and Tracking of Alloreactive T Cell Clones in Rhesus Macaques Through the RM-scTCR-Seq Platform

por Gerdemann, Ulrike, Fleming, Ryan A., Kaminski, James, McGuckin, Connor, Rui, Xianliang, Lane, Jennifer F., Keskula, Paula, Cagnin, Lorenzo, Shalek, Alex K., Tkachev, Victor, Kean, Leslie S.
Publicado 2022

Machine Learning Applicability for Classification of PAD/VCD Chemotherapy Response Using 53 Multiple Myeloma RNA Sequencing Profiles

por Borisov, Nicolas, Sergeeva, Anna, Suntsova, Maria, Raevskiy, Mikhail, Gaifullin, Nurshat, Mendeleeva, Larisa, Gudkov, Alexander, Nareiko, Maria, Garazha, Andrew, Tkachev, Victor, Li, Xinmin, Sorokin, Maxim, Surin, Vadim, Buzdin, Anton
Publicado 2021

Algorithmically Deduced FREM2 Molecular Pathway Is a Potent Grade and Survival Biomarker of Human Gliomas

por Zolotovskaia, Marianna, Tkachev, Victor, Sorokin, Maxim, Garazha, Andrew, Kim, Ella, Kantelhardt, Sven Rainer, Bikar, Sven-Ernö, Zottel, Alja, Šamec, Neja, Kuzmin, Denis, Sprang, Bettina, Moisseev, Alexey, Giese, Alf, Efimov, Victor, Jovčevska, Ivana, Buzdin, Anton
Publicado 2021