Factors That Control the Chemistry of the LOV Domain Photocycle

por Zayner, Josiah P., Sosnick, Tobin R.
Publicado 2014

On Docking, Scoring and Assessing Protein-DNA Complexes in a Rigid-Body Framework

por Parisien, Marc, Freed, Karl F., Sosnick, Tobin R.
Publicado 2012

Factors That Control the Force Needed to Unfold a Membrane Protein in Silico Depend on the Mode of Denaturation

por Faruk, Nabil F., Peng, Xiangda, Sosnick, Tobin R.
Publicado 2023

Helical Contributions Mediate Light-Activated Conformational Change in the LOV2 Domain of Avena sativa Phototropin 1

por Zayner, Josiah P., Mathes, Tilo, Sosnick, Tobin R., Kennis, John T. M.
Publicado 2019

Trajectory-based training enables protein simulations with accurate folding and Boltzmann ensembles in cpu-hours

por Jumper, John M., Faruk, Nabil F., Freed, Karl F., Sosnick, Tobin R.
Publicado 2018

Accurate calculation of side chain packing and free energy with applications to protein molecular dynamics

por Jumper, John M., Faruk, Nabil F., Freed, Karl F., Sosnick, Tobin R.
Publicado 2018

HDX-MS performed on BtuB in E. coli outer membranes delineates the luminal domain’s allostery and unfolding upon B12 and TonB binding

por Zmyslowski, Adam M., Baxa, Michael C., Gagnon, Isabelle A., Sosnick, Tobin R.
Publicado 2022

Development of in vivo HDX‐MS with applications to a TonB‐dependent transporter and other proteins

por Lin, Xiaoxuan, Zmyslowski, Adam M., Gagnon, Isabelle A., Nakamoto, Robert K., Sosnick, Tobin R.
Publicado 2022

Rationally improving LOV domain–based photoswitches

por Strickland, Devin, Yao, Xiaolan, Gawlak, Grzegorz, Rosen, Michael K., Gardner, Kevin H., Sosnick, Tobin R.
Publicado 2010

TULIPs: Tunable, light-controlled interacting protein tags for cell biology

por Strickland, Devin, Lin, Yuan, Wagner, Elizabeth, Hope, C. Matthew, Zayner, Josiah, Antoniou, Chloe, Sosnick, Tobin R., Weiss, Eric L., Glotzer, Michael
Publicado 2012

Validation of APACHE IV in patients with severe acute pancreatitis

por Kakar, P, Govil, D, Gupta, S, Srinivasan, S, Mehta, P, Prakash, O, Arora, D, Das, S, Govil, P, Malhotra, A, Tobin, R, Bajaj, P
Publicado 2008

An adaptive biomolecular condensation response is conserved across environmentally divergent species

por Kik, Samantha Keyport, Christopher, Dana, Glauninger, Hendrik, Hickernell, Caitlin Wong, Bard, Jared A. M., Ford, Michael, Sosnick, Tobin R., Drummond, D. Allan
Publicado 2023

Structural basis for adhesion G protein-coupled receptor Gpr126 function

por Leon, Katherine, Cunningham, Rebecca L., Riback, Joshua A., Feldman, Ezra, Li, Jingxian, Sosnick, Tobin R., Zhao, Minglei, Monk, Kelly R., Araç, Demet
Publicado 2020

Prediction and Validation of a Protein’s Free Energy Surface Using Hydrogen Exchange and (Importantly) Its Denaturant Dependence

por Peng, Xiangda, Baxa, Michael, Faruk, Nabil, Sachleben, Joseph R., Pintscher, Sebastian, Gagnon, Isabelle A., Houliston, Scott, Arrowsmith, Cheryl H., Freed, Karl F., Rocklin, Gabriel J., Sosnick, Tobin R.
Publicado 2021

Lipid bilayer induces contraction of the denatured state ensemble of a helical-bundle membrane protein

por Gaffney, Kristen A., Guo, Ruiqiong, Bridges, Michael D., Muhammednazaar, Shaima, Chen, Daoyang, Kim, Miyeon, Yang, Zhongyu, Schilmiller, Anthony L., Faruk, Nabil F., Peng, Xiangda, Jones, A. Daniel, Kim, Kelly H., Sun, Liangliang, Hubbell, Wayne L., Sosnick, Tobin R., Hong, Heedeok
Publicado 2021

Protein folds vs. protein folding: Differing questions, different challenges

por Chen, Shi-Jie, Hassan, Mubashir, Jernigan, Robert L., Jia, Kejue, Kihara, Daisuke, Kloczkowski, Andrzej, Kotelnikov, Sergei, Kozakov, Dima, Liang, Jie, Liwo, Adam, Matysiak, Silvina, Meller, Jarek, Micheletti, Cristian, Mitchell, Julie C., Mondal, Sayantan, Nussinov, Ruth, Okazaki, Kei-ichi, Padhorny, Dzmitry, Skolnick, Jeffrey, Sosnick, Tobin R., Stan, George, Vakser, Ilya, Zou, Xiaoqin, Rose, George D.
Publicado 2022