PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

por Suyama, Mikita, Torrents, David, Bork, Peer
Publicado 2006

Identification and Analysis of Genes and Pseudogenes within Duplicated Regions in the Human and Mouse Genomes

por Suyama, Mikita, Harrington, Eoghan, Bork, Peer, Torrents, David
Publicado 2006

Determining promoter location based on DNA structure first-principles calculations

por Goñi, J Ramon, Pérez, Alberto, Torrents, David, Orozco, Modesto
Publicado 2007

Adaptation to environmental factors shapes the organization of regulatory regions in microbial communities

por Fernandez, Leyden, Mercader, Josep M, Planas-Fèlix, Mercè, Torrents, David
Publicado 2014

Protein coding potential of retroviruses and other transposable elements in vertebrate genomes

por Zdobnov, Evgeny M., Campillos, Mónica, Harrington, Eoghan D., Torrents, David, Bork, Peer
Publicado 2005

Clustering and graph mining techniques for classification of complex structural variations in cancer genomes

por Gomez-Sanchez, Gonzalo, Delgado-Serrano, Luisa, Carrera, David, Torrents, David, Berral, Josep Ll.
Publicado 2022

Author Correction: Clustering and graph mining techniques for classification of complex structural variations in cancer genomes

por Gomez-Sanchez, Gonzalo, Delgado-Serrano, Luisa, Carrera, David, Torrents, David, Berral, Josep Ll.
Publicado 2022

Exhaustive Variant Interaction Analysis using Multifactor Dimensionality Reduction

por Gómez-Sánchez, Gonzalo, Alonso, Lorena, Pérez, Miguel Ángel, Morán, Ignasi, Torrents, David, Berral, Josep Ll.
Publicado 2023

ReLA, a local alignment search tool for the identification of distal and proximal gene regulatory regions and their conserved transcription factor binding sites

por González, Santi, Montserrat-Sentís, Bàrbara, Sánchez, Friman, Puiggròs, Montserrat, Blanco, Enrique, Ramirez, Alex, Torrents, David
Publicado 2012

Selective maintenance of Drosophila tandemly arranged duplicated genes during evolution

por Quijano, Carlos, Tomancak, Pavel, Lopez-Marti, Jesus, Suyama, Mikita, Bork, Peer, Milan, Marco, Torrents, David, Manzanares, Miguel
Publicado 2008

Impact of Transcriptome and Gut Microbiome on the Response of HIV-1 Infected Individuals to a Dendritic Cell-Based HIV Therapeutic Vaccine

por Pastor-Ibáñez, Roque, Díez-Fuertes, Francisco, Sánchez-Palomino, Sonsoles, Alcamí, Jose, Plana, Montserrat, Torrents, David, Leal, Lorna, García, Felipe
Publicado 2021

Unravelling the hidden DNA structural/physical code provides novel insights on promoter location

por Durán, Elisa, Djebali, Sarah, González, Santi, Flores, Oscar, Mercader, Josep Maria, Guigó, Roderic, Torrents, David, Soler-López, Montserrat, Orozco, Modesto
Publicado 2013

A cancer-associated polymorphism in ESCRT-III disrupts the abscission checkpoint and promotes genome instability

por Sadler, Jessica B. A., Wenzel, Dawn M., Strohacker, Lauren K., Guindo-Martínez, Marta, Alam, Steven L., Mercader, Josep M., Torrents, David, Ullman, Katharine S., Sundquist, Wesley I., Martin-Serrano, Juan
Publicado 2018

A functional IFN-λ4-generating DNA polymorphism could protect older asthmatic women from aeroallergen sensitization and associate with clinical features of asthma

por Chinnaswamy, Sreedhar, Wardzynska, Aleksandra, Pawelczyk, Malgorzata, Makowska, Joanna, Skaaby, Tea, Mercader, Josep M., Ahluwalia, Tarunveer S., Grarup, Niels, Guindo-Martinez, Marta, Bisgaard, Hans, Torrents, David, Linneberg, Allan, Bønnelykke, Klaus, Kowalski, Marek L.
Publicado 2017

Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria

por Eiler, Alexander, Mondav, Rhiannon, Sinclair, Lucas, Fernandez-Vidal, Leyden, Scofield, Douglas G, Schwientek, Patrick, Martinez-Garcia, Manuel, Torrents, David, McMahon, Katherine D, Andersson, Siv GE, Stepanauskas, Ramunas, Woyke, Tanja, Bertilsson, Stefan
Publicado 2016

Common Genetic Variants of Surfactant Protein-D (SP-D) Are Associated with Type 2 Diabetes

por Pueyo, Neus, Ortega, Francisco J., Mercader, Josep M., Moreno-Navarrete, José M., Sabater, Monica, Bonàs, Sílvia, Botas, Patricia, Delgado, Elías, Ricart, Wifredo, Martinez-Larrad, María T., Serrano-Ríos, Manuel, Torrents, David, Fernández-Real, José M.
Publicado 2013

Multitrait genome association analysis identifies new susceptibility genes for human anthropometric variation in the GCAT cohort

por Galván-Femenía, Iván, Obón-Santacana, Mireia, Piñeyro, David, Guindo-Martinez, Marta, Duran, Xavier, Carreras, Anna, Pluvinet, Raquel, Velasco, Juan, Ramos, Laia, Aussó, Susanna, Mercader, J M, Puig, Lluis, Perucho, Manuel, Torrents, David, Moreno, Victor, Sumoy, Lauro, de Cid, Rafael
Publicado 2018

Identification of Novel Type 2 Diabetes Candidate Genes Involved in the Crosstalk between the Mitochondrial and the Insulin Signaling Systems

por Mercader, Josep M., Puiggros, Montserrat, Segrè, Ayellet V., Planet, Evarist, Sorianello, Eleonora, Sebastian, David, Rodriguez-Cuenca, Sergio, Ribas, Vicent, Bonàs-Guarch, Sílvia, Draghici, Sorin, Yang, Chenjing, Mora, Sílvia, Vidal-Puig, Antoni, Dupuis, Josée, Florez, Jose C., Zorzano, Antonio, Torrents, David
Publicado 2012

Mutational topography reflects clinical neuroblastoma heterogeneity

por Rodriguez-Fos, Elias, Planas-Fèlix, Mercè, Burkert, Martin, Puiggròs, Montserrat, Toedling, Joern, Thiessen, Nina, Blanc, Eric, Szymansky, Annabell, Hertwig, Falk, Ishaque, Naveed, Beule, Dieter, Torrents, David, Eggert, Angelika, Koche, Richard P., Schwarz, Roland F., Haase, Kerstin, Schulte, Johannes H., Henssen, Anton G.
Publicado 2023

Insight into genetic predisposition to chronic lymphocytic leukemia from integrative epigenomics

por Speedy, Helen E., Beekman, Renée, Chapaprieta, Vicente, Orlando, Giulia, Law, Philip J., Martín-García, David, Gutiérrez-Abril, Jesús, Catovsky, Daniel, Beà, Sílvia, Clot, Guillem, Puiggròs, Montserrat, Torrents, David, Puente, Xose S., Allan, James M., López-Otín, Carlos, Campo, Elias, Houlston, Richard S., Martín-Subero, José I.
Publicado 2019