Inferring synteny between genome assemblies: a systematic evaluation

por Liu, Dang, Hunt, Martin, Tsai, Isheng J
Publicado 2018

Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

por Tsai, Isheng J, Otto, Thomas D, Berriman, Matthew
Publicado 2010

Estimating the Fitness Effects of New Mutations in the Wild Yeast Saccharomyces paradoxus

por Koufopanou, Vassiliki, Lomas, Susan, Tsai, Isheng J., Burt, Austin
Publicado 2015

An expressed, endogenous Nodavirus-like element captured by a retrotransposon in the genome of the plant parasitic nematode Bursaphelenchus xylophilus

por Cotton, James A., Steinbiss, Sascha, Yokoi, Toshiro, Tsai, Isheng J., Kikuchi, Taisei
Publicado 2016

Popmarker: Identifying Phylogenetic Markers at the Population Level

por Ke, Huei-Mien, Yu, Chun-Ping, Liu, Yu-Ching, Tsai, Isheng J
Publicado 2017

Summarizing Specific Profiles in Illumina Sequencing from Whole-Genome Amplified DNA

por Tsai, Isheng J., Hunt, Martin, Holroyd, Nancy, Huckvale, Thomas, Berriman, Matthew, Kikuchi, Taisei
Publicado 2014

Genetic Differentiation and Spatial Structure of Phellinus noxius, the Causal Agent of Brown Root Rot of Woody Plants in Japan

por Akiba, Mitsuteru, Ota, Yuko, Tsai, Isheng J., Hattori, Tsutomu, Sahashi, Norio, Kikuchi, Taisei
Publicado 2015

Glycoside Hydrolase (GH) 45 and 5 Candidate Cellulases in Aphelenchoides besseyi Isolated from Bird’s-Nest Fern

por Wu, Guan-Long, Kuo, Tzu-Hao, Tsay, Tung-Tsuan, Tsai, Isheng J., Chen, Peichen J.
Publicado 2016

Comparative Genomics of Taphrina Fungi Causing Varying Degrees of Tumorous Deformity in Plants

por Tsai, Isheng J., Tanaka, Eiji, Masuya, Hayato, Tanaka, Ryusei, Hirooka, Yuuri, Endoh, Rikiya, Sahashi, Norio, Kikuchi, Taisei
Publicado 2014

Distribution and evolution of glycoside hydrolase family 45 cellulases in nematodes and fungi

por Palomares-Rius, Juan E, Hirooka, Yuuri, Tsai, Isheng J, Masuya, Hayato, Hino, Akina, Kanzaki, Natsumi, Jones, John T, Kikuchi, Taisei
Publicado 2014

Genome-wide variation in the pinewood nematode Bursaphelenchus xylophilus and its relationship with pathogenic traits

por Palomares-Rius, Juan E., Tsai, Isheng J., Karim, Nurul, Akiba, Mitsuteru, Kato, Tetsuro, Maruyama, Haruhiko, Takeuchi, Yuko, Kikuchi, Taisei
Publicado 2015

Evidence of Extensive Intraspecific Noncoding Reshuffling in a 169-kb Mitochondrial Genome of a Basidiomycetous Fungus

por Lee, Hsin-Han, Ke, Huei-Mien, Lin, Chan-Yi Ivy, Lee, Tracy J, Chung, Chia-Lin, Tsai, Isheng J
Publicado 2019

Assessment of Helminth Biodiversity in Wild Rats Using 18S rDNA Based Metagenomics

por Tanaka, Ryusei, Hino, Akina, Tsai, Isheng J., Palomares-Rius, Juan Emilio, Yoshida, Ayako, Ogura, Yoshitoshi, Hayashi, Tetsuya, Maruyama, Haruhiko, Kikuchi, Taisei
Publicado 2014

Structure and Diversity of Soil Bacterial Communities in Offshore Islands

por Lin, Yu-Te, Lin, Yu-Fei, Tsai, Isheng J., Chang, Ed-Haun, Jien, Shih-Hao, Lin, Yen-Ju, Chiu, Chih-Yu
Publicado 2019

Sequential Changes in the Host Gut Microbiota During Infection With the Intestinal Parasitic Nematode Strongyloides venezuelensis

por Afrin, Tanzila, Murase, Kazunori, Kounosu, Asuka, Hunt, Vicky L., Bligh, Mark, Maeda, Yasunobu, Hino, Akina, Maruyama, Haruhiko, Tsai, Isheng J., Kikuchi, Taisei
Publicado 2019

Stage-specific transcriptome of Bursaphelenchus xylophilus reveals temporal regulation of effector genes and roles of the dauer-like stages in the lifecycle

por Tanaka, Suguru E., Dayi, Mehmet, Maeda, Yasunobu, Tsai, Isheng J., Tanaka, Ryusei, Bligh, Mark, Takeuchi-Kaneko, Yuko, Fukuda, Kenji, Kanzaki, Natsumi, Kikuchi, Taisei
Publicado 2019

Germline Transgenesis and Insertional Mutagenesis in Schistosoma mansoni Mediated by Murine Leukemia Virus

por Rinaldi, Gabriel, Eckert, Sabine E., Tsai, Isheng J., Suttiprapa, Sutas, Kines, Kristine J., Tort, José F., Mann, Victoria H., Turner, Daniel J., Berriman, Matthew, Brindley, Paul J.
Publicado 2012

Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi clade

por Ke, Huei-Mien, Prachumwat, Anuphap, Yu, Chun-Ping, Yang, Yi-Ting, Promsri, Sutitcha, Liu, Kuan-Fu, Lo, Chu-Fang, Lu, Mei-Yeh Jade, Lai, Mei-Chin, Tsai, Isheng J., Li, Wen-Hsiung
Publicado 2017

The rectal mucosal but not fecal microbiota detects subclinical ulcerative colitis

por Lin, Yu-Fei, Sung, Chang Mu, Ke, Huei-Mien, Kuo, Chia-Jung, Liu, Wei-an, Tsai, Wen-Sy, Lin, Cheng-Yu, Cheng, Hao-Tsai, Lu, Meiyeh J, Tsai, Isheng. J., Hsieh, Sen-Yung
Publicado 2021

HIV-1 Integrates Widely throughout the Genome of the Human Blood Fluke Schistosoma mansoni

por Suttiprapa, Sutas, Rinaldi, Gabriel, Tsai, Isheng J., Mann, Victoria H., Dubrovsky, Larisa, Yan, Hong-bin, Holroyd, Nancy, Huckvale, Thomas, Durrant, Caroline, Protasio, Anna V., Pushkarsky, Tatiana, Iordanskiy, Sergey, Berriman, Matthew, Bukrinsky, Michael I., Brindley, Paul J.
Publicado 2016