link-ancestors: fast simulation of local ancestry with tree sequence software

por Tsambos, Georgia, Kelleher, Jerome, Ralph, Peter, Leslie, Stephen, Vukcevic, Damjan
Publicado 2023

A community-maintained standard library of population genetic models

por Adrion, Jeffrey R, Cole, Christopher B, Dukler, Noah, Galloway, Jared G, Gladstein, Ariella L, Gower, Graham, Kyriazis, Christopher C, Ragsdale, Aaron P, Tsambos, Georgia, Baumdicker, Franz, Carlson, Jedidiah, Cartwright, Reed A, Durvasula, Arun, Gronau, Ilan, Kim, Bernard Y, McKenzie, Patrick, Messer, Philipp W, Noskova, Ekaterina, Ortega-Del Vecchyo, Diego, Racimo, Fernando, Struck, Travis J, Gravel, Simon, Gutenkunst, Ryan N, Lohmueller, Kirk E, Ralph, Peter L, Schrider, Daniel R, Siepel, Adam, Kelleher, Jerome, Kern, Andrew D
Publicado 2020

Efficient ancestry and mutation simulation with msprime 1.0

por Baumdicker, Franz, Bisschop, Gertjan, Goldstein, Daniel, Gower, Graham, Ragsdale, Aaron P, Tsambos, Georgia, Zhu, Sha, Eldon, Bjarki, Ellerman, E Castedo, Galloway, Jared G, Gladstein, Ariella L, Gorjanc, Gregor, Guo, Bing, Jeffery, Ben, Kretzschumar, Warren W, Lohse, Konrad, Matschiner, Michael, Nelson, Dominic, Pope, Nathaniel S, Quinto-Cortés, Consuelo D, Rodrigues, Murillo F, Saunack, Kumar, Sellinger, Thibaut, Thornton, Kevin, van Kemenade, Hugo, Wohns, Anthony W, Wong, Yan, Gravel, Simon, Kern, Andrew D, Koskela, Jere, Ralph, Peter L, Kelleher, Jerome
Publicado 2021

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

por Lauterbur, M Elise, Cavassim, Maria Izabel A, Gladstein, Ariella L, Gower, Graham, Pope, Nathaniel S, Tsambos, Georgia, Adrion, Jeffrey, Belsare, Saurabh, Biddanda, Arjun, Caudill, Victoria, Cury, Jean, Echevarria, Ignacio, Haller, Benjamin C, Hasan, Ahmed R, Huang, Xin, Iasi, Leonardo Nicola Martin, Noskova, Ekaterina, Obsteter, Jana, Pavinato, Vitor Antonio Correa, Pearson, Alice, Peede, David, Perez, Manolo F, Rodrigues, Murillo F, Smith, Chris CR, Spence, Jeffrey P, Teterina, Anastasia, Tittes, Silas, Unneberg, Per, Vazquez, Juan Manuel, Waples, Ryan K, Wohns, Anthony Wilder, Wong, Yan, Baumdicker, Franz, Cartwright, Reed A, Gorjanc, Gregor, Gutenkunst, Ryan N, Kelleher, Jerome, Kern, Andrew D, Ragsdale, Aaron P, Ralph, Peter L, Schrider, Daniel R, Gronau, Ilan
Publicado 2023