An Automated Nanowell-Array Workflow for Quantitative Multiplexed Single-Cell Proteomics Sample Preparation at High Sensitivity

por Ctortecka, Claudia, Hartlmayr, David, Seth, Anjali, Mendjan, Sasha, Tourniaire, Guilhem, Udeshi, Namrata D., Carr, Steven A., Mechtler, Karl
Publicado 2023

Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation

por Hung, Victoria, Lam, Stephanie S, Udeshi, Namrata D, Svinkina, Tanya, Guzman, Gaelen, Mootha, Vamsi K, Carr, Steven A, Ting, Alice Y
Publicado 2017

Correction: Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation

por Hung, Victoria, Lam, Stephanie S, Udeshi, Namrata D, Svinkina, Tanya, Guzman, Gaelen, Mootha, Vamsi K, Carr, Steven A, Ting, Alice Y
Publicado 2019

Lso2 is a conserved ribosome-bound protein required for translational recovery in yeast

por Wang, Yinuo J., Vaidyanathan, Pavanapuresan P., Rojas-Duran, Maria F., Udeshi, Namrata D., Bartoli, Kristen M., Carr, Steven A., Gilbert, Wendy V.
Publicado 2018

Automating UbiFast for High-throughput and Multiplexed Ubiquitin Enrichment

por Rivera, Keith D., Olive, Meagan E., Bergstrom, Erik J., Nelson, Alissa J., Lee, Kimberly A., Satpathy, Shankha, Carr, Steven A., Udeshi, Namrata D.
Publicado 2021

Efficient proximity labeling in living cells and organisms with TurboID

por Branon, Tess C., Bosch, Justin A., Sanchez, Ariana D., Udeshi, Namrata D., Svinkina, Tanya, Carr, Steven A., Feldman, Jessica L., Perrimon, Norbert, Ting, Alice Y.
Publicado 2018

Rapid and deep-scale ubiquitylation profiling for biology and translational research

por Udeshi, Namrata D., Mani, Deepak C., Satpathy, Shankha, Fereshetian, Shaunt, Gasser, Jessica A., Svinkina, Tanya, Olive, Meagan E., Ebert, Benjamin L., Mertins, Philipp, Carr, Steven A.
Publicado 2020

An engineered transcriptional reporter of protein localization identifies regulators of mitochondrial and ER membrane protein trafficking in high-throughput CRISPRi screens

por Coukos, Robert, Yao, David, Sanchez, Mateo I, Strand, Eric T, Olive, Meagan E, Udeshi, Namrata D, Weissman, Jonathan S, Carr, Steven A, Bassik, Michael C, Ting, Alice Y
Publicado 2021

Sensitive, High-Throughput HLA-I and HLA-II Immunopeptidomics Using Parallel Accumulation-Serial Fragmentation Mass Spectrometry

por Phulphagar, Kshiti Meera, Ctortecka, Claudia, Jacome, Alvaro Sebastian Vaca, Klaeger, Susan, Verzani, Eva K., Hernandez, Gabrielle M., Udeshi, Namrata D., Clauser, Karl R., Abelin, Jennifer G., Carr, Steven A.
Publicado 2023

Quantitative-Proteomic Comparison of Alpha and Beta Cells to Uncover Novel Targets for Lineage Reprogramming

por Choudhary, Amit, Hu He, Kaihui, Mertins, Philipp, Udeshi, Namrata D., Dančík, Vlado, Fomina-Yadlin, Dina, Kubicek, Stefan, Clemons, Paul A., Schreiber, Stuart L., Carr, Steven A., Wagner, Bridget K.
Publicado 2014

The C9orf72-interacting protein Smcr8 is a negative regulator of autoimmunity and lysosomal exocytosis

por Zhang, Yingying, Burberry, Aaron, Wang, Jin-Yuan, Sandoe, Jackson, Ghosh, Sulagna, Udeshi, Namrata D., Svinkina, Tanya, Mordes, Daniel A., Mok, Joanie, Charlton, Maura, Li, Quan-Zhen, Carr, Steven A., Eggan, Kevin
Publicado 2018

Antibodies to biotin enable large-scale detection of biotinylation sites on proteins

por Udeshi, Namrata D, Pedram, Kayvon, Svinkina, Tanya, Fereshetian, Shaunt, Myers, Samuel A, Aygun, Ozan, Krug, Karsten, Clauser, Karl, Ryan, Dominic, Ast, Tslil, Mootha, Vamsi K, Ting, Alice Y, Carr, Steven A
Publicado 2017

Protein phosphatase 1 regulates core PCP signaling

por Song, Song, Cho, Bomsoo, Weiner, Alexis T., Nissen, Silas Boye, Naharros, Irene Ojeda, Bosch, Pablo Sanchez, Suyama, Kaye, Hu, Yanhui, He, Li, Svinkina, Tanya, Udeshi, Namrata D., Carr, Steven A., Perrimon, Norbert, Axelrod, Jeffrey D.
Publicado 2023

RNF43 G659fs is an oncogenic colorectal cancer mutation and sensitizes tumor cells to PI3K/mTOR inhibition

por Fang, Lishan, Ford-Roshon, Dane, Russo, Max, O’Brien, Casey, Xiong, Xiaozhe, Gurjao, Carino, Grandclaudon, Maximilien, Raghavan, Srivatsan, Corsello, Steven M., Carr, Steven A., Udeshi, Namrata D., Berstler, James, Sicinska, Ewa, Ng, Kimmie, Giannakis, Marios
Publicado 2022

Dynamic regulation of inter-organelle communication by ubiquitylation controls skeletal muscle development and disease onset

por Mansur, Arian, Joseph, Remi, Kim, Euri S, Jean-Beltran, Pierre M, Udeshi, Namrata D, Pearce, Cadence, Jiang, Hanjie, Iwase, Reina, Milev, Miroslav P, Almousa, Hashem A, McNamara, Elyshia, Widrick, Jeffrey, Perez, Claudio, Ravenscroft, Gianina, Sacher, Michael, Cole, Philip A, Carr, Steven A, Gupta, Vandana A
Publicado 2023

A genetic model for in vivo proximity labelling of the mammalian secretome

por Yang, Rui, Meyer, Amanda S., Droujinine, Ilia A., Udeshi, Namrata D., Hu, Yanhui, Guo, Jinjin, McMahon, Jill A., Carey, Dominique K., Xu, Charles, Fang, Qiao, Sha, Jihui, Qin, Shishang, Rocco, David, Wohlschlegel, James, Ting, Alice Y., Carr, Steven A., Perrimon, Norbert, McMahon, Andrew P.
Publicado 2022

Discovery of suppressors of CRMP2 phosphorylation reveals compounds that mimic the behavioral effects of lithium on amphetamine-induced hyperlocomotion

por Zhao, Wen-Ning, Tobe, Brian T. D., Udeshi, Namrata D., Xuan, Lucius L., Pernia, Cameron D., Zolg, Daniel P., Roberts, Amanda J., Mani, Deepak, Blumenthal, Sarah R., Kurtser, Iren, Patnaik, Debasis, Gaisina, Irina, Bishop, Joshua, Sheridan, Steven D., Lalonde, Jasmin, Carr, Steven A., Snyder, Evan Y., Haggarty, Stephen J.
Publicado 2020

Regulation of purine metabolism connects KCTD13 to a metabolic disorder with autistic features

por Madison, Jon M., Duong, Karen, Vieux, Ellen F., Udeshi, Namrata D., Iqbal, Sumaiya, Requadt, Elise, Fereshetian, Shaunt, Lewis, Michael C., Gomes, Antonio S., Pierce, Kerry A., Platt, Randall J., Zhang, Feng, Campbell, Arthur J., Lal, Dennis, Wagner, Florence F., Clish, Clary B., Carr, Steven A., Sheng, Morgan, Scolnick, Edward M., Cottrell, Jeffrey R.
Publicado 2020

An Unbiased Approach To Identify Endogenous Substrates of “Histone” Deacetylase 8

por Olson, David E., Udeshi, Namrata D., Wolfson, Noah A., Pitcairn, Carol Ann, Sullivan, Eric D., Jaffe, Jacob D., Svinkina, Tanya, Natoli, Ted, Lu, Xiaodong, Paulk, Joshiawa, McCarren, Patrick, Wagner, Florence F., Barker, Doug, Howe, Eleanor, Lazzaro, Fanny, Gale, Jennifer P., Zhang, Yan-Ling, Subramanian, Aravind, Fierke, Carol A., Carr, Steven A., Holson, Edward B.
Publicado 2014

Proteomics of protein trafficking by in vivo tissue-specific labeling

por Droujinine, Ilia A., Meyer, Amanda S., Wang, Dan, Udeshi, Namrata D., Hu, Yanhui, Rocco, David, McMahon, Jill A., Yang, Rui, Guo, JinJin, Mu, Luye, Carey, Dominique K., Svinkina, Tanya, Zeng, Rebecca, Branon, Tess, Tabatabai, Areya, Bosch, Justin A., Asara, John M., Ting, Alice Y., Carr, Steven A., McMahon, Andrew P., Perrimon, Norbert
Publicado 2021