SLIMS—a user-friendly sample operations and inventory management system for genotyping labs

por Van Rossum, Thea, Tripp, Ben, Daley, Denise
Publicado 2010

Evaluation of shotgun metagenomics sequence classification methods using in silico and in vitro simulated communities

por Peabody, Michael A., Van Rossum, Thea, Lo, Raymond, Brinkman, Fiona S. L.
Publicado 2015

The Composition of Midgut Bacteria in Aedes aegypti (Diptera: Culicidae) That Are Naturally Susceptible or Refractory to Dengue Viruses

por Coatsworth, Heather, Caicedo, Paola A, Van Rossum, Thea, Ocampo, Clara B, Lowenberger, Carl
Publicado 2018

The Burkholderia Genome Database: facilitating flexible queries and comparative analyses

por Winsor, Geoffrey L., Khaira, Bhavjinder, Van Rossum, Thea, Lo, Raymond, Whiteside, Matthew D., Brinkman, Fiona S. L.
Publicado 2008

metaSNV v2: detection of SNVs and subspecies in prokaryotic metagenomes

por Van Rossum, Thea, Costea, Paul I, Paoli, Lucas, Alves, Renato, Thielemann, Roman, Sunagawa, Shinichi, Bork, Peer
Publicado 2021

Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes

por Winsor, Geoffrey L., Van Rossum, Thea, Lo, Raymond, Khaira, Bhavjinder, Whiteside, Matthew D., Hancock, Robert E. W., Brinkman, Fiona S. L.
Publicado 2009

Meconium Microbiome of Very Preterm Infants across Germany

por Klopp, Jonas, Ferretti, Pamela, Meyer, Claudius U., Hilbert, Katja, Haiß, Annette, Marißen, Janina, Henneke, Philipp, Hudalla, Hannes, Pirr, Sabine, Viemann, Dorothee, Zemlin, Michael, Forslund, Sofia Kirke, Härtel, Christoph, Bork, Peer, Gehring, Stephan, Van Rossum, Thea
Publicado 2022

Year-Long Metagenomic Study of River Microbiomes Across Land Use and Water Quality

por Van Rossum, Thea, Peabody, Michael A., Uyaguari-Diaz, Miguel I., Cronin, Kirby I., Chan, Michael, Slobodan, Jared R., Nesbitt, Matthew J., Suttle, Curtis A., Hsiao, William W. L., Tang, Patrick K. C., Prystajecky, Natalie A., Brinkman, Fiona S. L.
Publicado 2015

A comprehensive method for amplicon-based and metagenomic characterization of viruses, bacteria, and eukaryotes in freshwater samples

por Uyaguari-Diaz, Miguel I., Chan, Michael, Chaban, Bonnie L., Croxen, Matthew A., Finke, Jan F., Hill, Janet E., Peabody, Michael A., Van Rossum, Thea, Suttle, Curtis A., Brinkman, Fiona S. L., Isaac-Renton, Judith, Prystajecky, Natalie A., Tang, Patrick
Publicado 2016

Efficacy of Bifidobacterium animalis subsp. lactis (BB-12), B. infantis and Lactobacillus acidophilus (La-5) probiotics to prevent gut dysbiosis in preterm infants of 28+0–32+6 wee...

por Marißen, Janina, Haiß, Annette, Meyer, Claudius, Van Rossum, Thea, Bünte, Lisa Marie, Frommhold, David, Gille, Christian, Goedicke-Fritz, Sybelle, Göpel, Wolfgang, Hudalla, Hannes, Pagel, Julia, Pirr, Sabine, Siller, Bastian, Viemann, Dorothee, Vens, Maren, König, Inke, Herting, Egbert, Zemlin, Michael, Gehring, Stephan, Bork, Peer, Henneke, Philipp, Härtel, Christoph
Publicado 2019

Drivers and determinants of strain dynamics following fecal microbiota transplantation

por Schmidt, Thomas S. B., Li, Simone S., Maistrenko, Oleksandr M., Akanni, Wasiu, Coelho, Luis Pedro, Dolai, Sibasish, Fullam, Anthony, Glazek, Anna M., Hercog, Rajna, Herrema, Hilde, Jung, Ferris, Kandels, Stefanie, Orakov, Askarbek, Thielemann, Roman, von Stetten, Moritz, Van Rossum, Thea, Benes, Vladimir, Borody, Thomas J., de Vos, Willem M., Ponsioen, Cyriel Y., Nieuwdorp, Max, Bork, Peer
Publicado 2022

A faecal microbiota signature with high specificity for pancreatic cancer

por Kartal, Ece, Schmidt, Thomas S B, Molina-Montes, Esther, Rodríguez-Perales, Sandra, Wirbel, Jakob, Maistrenko, Oleksandr M, Akanni, Wasiu A, Alashkar Alhamwe, Bilal, Alves, Renato J, Carrato, Alfredo, Erasmus, Hans-Peter, Estudillo, Lidia, Finkelmeier, Fabian, Fullam, Anthony, Glazek, Anna M, Gómez-Rubio, Paulina, Hercog, Rajna, Jung, Ferris, Kandels, Stefanie, Kersting, Stephan, Langheinrich, Melanie, Márquez, Mirari, Molero, Xavier, Orakov, Askarbek, Van Rossum, Thea, Torres-Ruiz, Raul, Telzerow, Anja, Zych, Konrad, Benes, Vladimir, Zeller, Georg, Trebicka, Jonel, Real, Francisco X, Malats, Nuria, Bork, Peer
Publicado 2022