Multivariate analysis reveals activation-primed fibroblast geometric states in engineered 3D tumor microenvironments

por Venkatachalapathy, Saradha, Jokhun, Doorgesh Sharma, Shivashankar, G. V.
Publicado 2020

Single cell imaging-based chromatin biomarkers for tumor progression

por Venkatachalapathy, Saradha, Jokhun, Doorgesh S., Andhari, Madhavi, Shivashankar, G. V.
Publicado 2021

Actomyosin contractility as a mechanical checkpoint for cell state transitions

por Venkatachalapathy, Saradha, Sreekumar, Dyuthi, Ratna, Prasuna, Shivashankar, G. V.
Publicado 2022

Network analysis identifies chromosome intermingling regions as regulatory hotspots for transcription

por Belyaeva, Anastasiya, Venkatachalapathy, Saradha, Nagarajan, Mallika, Shivashankar, G. V., Uhler, Caroline
Publicado 2017

Predicting cell lineages using autoencoders and optimal transport

por Yang, Karren Dai, Damodaran, Karthik, Venkatachalapathy, Saradha, Soylemezoglu, Ali C., Shivashankar, G. V., Uhler, Caroline
Publicado 2020

Laterally confined growth of cells induces nuclear reprogramming in the absence of exogenous biochemical factors

por Roy, Bibhas, Venkatachalapathy, Saradha, Ratna, Prasuna, Wang, Yejun, Jokhun, Doorgesh Sharma, Nagarajan, Mallika, Shivashankar, G. V.
Publicado 2018

Detecting radio- and chemoresistant cells in 3D cancer co-cultures using chromatin biomarkers

por Pekeč, Tina, Venkatachalapathy, Saradha, Shim, Anne R., Paysan, Daniel, Grzmil, Michal, Schibli, Roger, Béhé, Martin, Shivashankar, G. V.
Publicado 2023

Compressive force induces reversible chromatin condensation and cell geometry–dependent transcriptional response

por Damodaran, Karthik, Venkatachalapathy, Saradha, Alisafaei, Farid, Radhakrishnan, A. V., Sharma Jokhun, Doorgesh, Shenoy, Vivek B., Shivashankar, G. V.
Publicado 2018

Multi-domain translation between single-cell imaging and sequencing data using autoencoders

por Yang, Karren Dai, Belyaeva, Anastasiya, Venkatachalapathy, Saradha, Damodaran, Karthik, Katcoff, Abigail, Radhakrishnan, Adityanarayanan, Shivashankar, G. V., Uhler, Caroline
Publicado 2021