MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks

por Cottret, Ludovic, Wildridge, David, Vinson, Florence, Barrett, Michael P., Charles, Hubert, Sagot, Marie-France, Jourdan, Fabien
Publicado 2010

MetExploreViz: web component for interactive metabolic network visualization

por Chazalviel, Maxime, Frainay, Clément, Poupin, Nathalie, Vinson, Florence, Merlet, Benjamin, Gloaguen, Yoann, Cottret, Ludovic, Jourdan, Fabien
Publicado 2018

A Computational Solution to Automatically Map Metabolite Libraries in the Context of Genome Scale Metabolic Networks

por Merlet, Benjamin, Paulhe, Nils, Vinson, Florence, Frainay, Clément, Chazalviel, Maxime, Poupin, Nathalie, Gloaguen, Yoann, Giacomoni, Franck, Jourdan, Fabien
Publicado 2016

Suggesting disease associations for overlooked metabolites using literature from metabolic neighbors

por Delmas, Maxime, Filangi, Olivier, Duperier, Christophe, Paulhe, Nils, Vinson, Florence, Rodriguez-Mier, Pablo, Giacomoni, Franck, Jourdan, Fabien, Frainay, Clément
Publicado 2023

MetaboRank: network-based recommendation system to interpret and enrich metabolomics results

por Frainay, Clément, Aros, Sandrine, Chazalviel, Maxime, Garcia, Thomas, Vinson, Florence, Weiss, Nicolas, Colsch, Benoit, Sedel, Frédéric, Thabut, Dominique, Junot, Christophe, Jourdan, Fabien
Publicado 2019

Pathway analysis in metabolomics: Recommendations for the use of over-representation analysis

por Wieder, Cecilia, Frainay, Clément, Poupin, Nathalie, Rodríguez-Mier, Pablo, Vinson, Florence, Cooke, Juliette, Lai, Rachel PJ, Bundy, Jacob G., Jourdan, Fabien, Ebbels, Timothy
Publicado 2021

FORUM: building a Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases

por Delmas, Maxime, Filangi, Olivier, Paulhe, Nils, Vinson, Florence, Duperier, Christophe, Garrier, William, Saunier, Paul-Emeric, Pitarch, Yoann, Jourdan, Fabien, Giacomoni, Franck, Frainay, Clément
Publicado 2021

Dynamic Metabolic Disruption in Rats Perinatally Exposed to Low Doses of Bisphenol-A

por Tremblay-Franco, Marie, Cabaton, Nicolas J., Canlet, Cécile, Gautier, Roselyne, Schaeberle, Cheryl M., Jourdan, Fabien, Sonnenschein, Carlos, Vinson, Florence, Soto, Ana M., Zalko, Daniel
Publicado 2015

MetExplore: collaborative edition and exploration of metabolic networks

por Cottret, Ludovic, Frainay, Clément, Chazalviel, Maxime, Cabanettes, Floréal, Gloaguen, Yoann, Camenen, Etienne, Merlet, Benjamin, Heux, Stéphanie, Portais, Jean-Charles, Poupin, Nathalie, Vinson, Florence, Jourdan, Fabien
Publicado 2018

Avoiding the Misuse of Pathway Analysis Tools in Environmental Metabolomics

por Wieder, Cecilia, Bundy, Jacob G., Frainay, Clément, Poupin, Nathalie, Rodríguez-Mier, Pablo, Vinson, Florence, Cooke, Juliette, Lai, Rachel P. J., Jourdan, Fabien, Ebbels, Timothy M. D.
Publicado 2022

Improving lipid mapping in Genome Scale Metabolic Networks using ontologies

por Poupin, Nathalie, Vinson, Florence, Moreau, Arthur, Batut, Aurélie, Chazalviel, Maxime, Colsch, Benoit, Fouillen, Laetitia, Guez, Sarah, Khoury, Spiro, Dalloux-Chioccioli, Jessica, Tournadre, Anthony, Le Faouder, Pauline, Pouyet, Corinne, Van Delft, Pierre, Viars, Fanny, Bertrand-Michel, Justine, Jourdan, Fabien
Publicado 2020

Multiplatform metabolomics for an integrative exploration of metabolic syndrome in older men

por Comte, Blandine, Monnerie, Stéphanie, Brandolini-Bunlon, Marion, Canlet, Cécile, Castelli, Florence, Chu-Van, Emeline, Colsch, Benoit, Fenaille, François, Joly, Charlotte, Jourdan, Fabien, Lenuzza, Natacha, Lyan, Bernard, Martin, Jean-François, Migné, Carole, Morais, José A., Pétéra, Mélanie, Poupin, Nathalie, Vinson, Florence, Thevenot, Etienne, Junot, Christophe, Gaudreau, Pierrette, Pujos-Guillot, Estelle
Publicado 2021

TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei

por Shameer, Sanu, Logan-Klumpler, Flora J., Vinson, Florence, Cottret, Ludovic, Merlet, Benjamin, Achcar, Fiona, Boshart, Michael, Berriman, Matthew, Breitling, Rainer, Bringaud, Frédéric, Bütikofer, Peter, Cattanach, Amy M., Bannerman-Chukualim, Bridget, Creek, Darren J., Crouch, Kathryn, de Koning, Harry P., Denise, Hubert, Ebikeme, Charles, Fairlamb, Alan H., Ferguson, Michael A. J., Ginger, Michael L., Hertz-Fowler, Christiane, Kerkhoven, Eduard J., Mäser, Pascal, Michels, Paul A. M., Nayak, Archana, Nes, David W., Nolan, Derek P., Olsen, Christian, Silva-Franco, Fatima, Smith, Terry K., Taylor, Martin C., Tielens, Aloysius G. M., Urbaniak, Michael D., van Hellemond, Jaap J., Vincent, Isabel M., Wilkinson, Shane R., Wyllie, Susan, Opperdoes, Fred R., Barrett, Michael P., Jourdan, Fabien
Publicado 2014