A Golden Age for Working with Public Proteomics Data

por Martens, Lennart, Vizcaíno, Juan Antonio
Publicado 2017

Proteomics data repositories: Providing a safe haven for your data and acting as a springboard for further research

por Vizcaíno, Juan Antonio, Foster, Joseph M., Martens, Lennart
Publicado 2010

Future Prospects of Spectral Clustering Approaches in Proteomics

por Perez‐Riverol, Yasset, Vizcaíno, Juan Antonio, Griss, Johannes
Publicado 2018

Is DIA proteomics data FAIR? Current data sharing practices, available bioinformatics infrastructure and recommendations for the future

por Jones, Andrew R., Deutsch, Eric W., Vizcaíno, Juan Antonio
Publicado 2022

jmzReader: A Java parser library to process and visualize multiple text and XML-based mass spectrometry data formats

por Griss, Johannes, Reisinger, Florian, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2012

The growing need for controlled data access models in clinical proteomics and metabolomics

por Keane, Thomas M., O’Donovan, Claire, Vizcaíno, Juan Antonio
Publicado 2021

Open source libraries and frameworks for biological data visualisation: A guide for developers

por Wang, Rui, Perez-Riverol, Yasset, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2015

Identifying novel biomarkers through data mining—A realistic scenario?

por Griss, Johannes, Perez‐Riverol, Yasset, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2015

Identifying individuals using proteomics: are we there yet?

por Fierro-Monti, Ivo, Wright, James C., Choudhary, Jyoti S., Vizcaíno, Juan Antonio
Publicado 2022

Published and Perished? The Influence of the Searched Protein Database on the Long-Term Storage of Proteomics Data

por Griss, Johannes, Côté, Richard G., Gerner, Christopher, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2011

Making proteomics data accessible and reusable: Current state of proteomics databases and repositories

por Perez-Riverol, Yasset, Alpi, Emanuele, Wang, Rui, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2015

Introducing the PRIDE Archive RESTful web services

por Reisinger, Florian, del-Toro, Noemi, Ternent, Tobias, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2015

Data Management of Sensitive Human Proteomics Data: Current Practices, Recommendations, and Perspectives for the Future

por Bandeira, Nuno, Deutsch, Eric W., Kohlbacher, Oliver, Martens, Lennart, Vizcaíno, Juan Antonio
Publicado 2021

Gene expression analysis of the biocontrol fungus Trichoderma harzianum in the presence of tomato plants, chitin, or glucose using a high-density oligonucleotide microarray

por Samolski, Ilanit, de Luis, Alberto, Vizcaíno, Juan Antonio, Monte, Enrique, Suárez, M Belén
Publicado 2009

The Ontology Lookup Service: bigger and better

por Côté, Richard, Reisinger, Florian, Martens, Lennart, Barsnes, Harald, Vizcaino, Juan Antonio, Hermjakob, Henning
Publicado 2010

Pride-asap: Automatic fragment ion annotation of identified PRIDE spectra()

por Hulstaert, Niels, Reisinger, Florian, Rameseder, Jonathan, Barsnes, Harald, Vizcaíno, Juan Antonio, Martens, Lennart
Publicado 2013

Analysis of the Protein Domain and Domain Architecture Content in Fungi and Its Application in the Search of New Antifungal Targets

por Barrera, Alejandro, Alastruey-Izquierdo, Ana, Martín, María J., Cuesta, Isabel, Vizcaíno, Juan Antonio
Publicado 2014

Accurate and fast feature selection workflow for high-dimensional omics data

por Perez-Riverol, Yasset, Kuhn, Max, Vizcaíno, Juan Antonio, Hitz, Marc-Phillip, Audain, Enrique
Publicado 2017

Consequences of the discontinuation of the International Protein Index (IPI) database and its substitution by the UniProtKB “complete proteome” sets

por Griss, Johannes, Martín, María, O'Donovan, Claire, Apweiler, Rolf, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado 2011

Open source libraries and frameworks for mass spectrometry based proteomics: A developer's perspective()

por Perez-Riverol, Yasset, Wang, Rui, Hermjakob, Henning, Müller, Markus, Vesada, Vladimir, Vizcaíno, Juan Antonio
Publicado 2014