The Virtual Xenbase: transitioning an online bioinformatics resource to a private cloud

por Karimi, Kamran, Vize, Peter D.
Publicado 2014

Separate Introns Gained within Short and Long Soluble Peridinin-Chlorophyll a-Protein Genes during Radiation of Symbiodinium (Dinophyceae) Clade A and B Lineages

por Reichman, Jay R., Vize, Peter D.
Publicado 2014

Embryonic and aglomerular kidney development in the bay pipefish, Syngnathus leptorhynchus

por Maters, Bianca R., Stevenson, Emily, Vize, Peter D.
Publicado 2022

Circadian Cycles of Gene Expression in the Coral, Acropora millepora

por Brady, Aisling K., Snyder, Kevin A., Vize, Peter D.
Publicado 2011

Ecological Complexity of Coral Recruitment Processes: Effects of Invertebrate Herbivores on Coral Recruitment and Growth Depends Upon Substratum Properties and Coral Species

por Davies, Sarah W., Matz, Mikhail V., Vize, Peter D.
Publicado 2013

An ontology for Xenopus anatomy and development

por Segerdell, Erik, Bowes, Jeff B, Pollet, Nicolas, Vize, Peter D
Publicado 2008

Distinguishing Species Using GC Contents in Mixed DNA or RNA Sequences

por Karimi, Kamran, Wuitchik, Daniel M, Oldach, Matthew J, Vize, Peter D
Publicado 2018

Integration of 1:1 orthology maps and updated datasets into Echinobase

por Foley, Saoirse, Ku, Carolyn, Arshinoff, Brad, Lotay, Vaneet, Karimi, Kamran, Vize, Peter D, Hinman, Veronica
Publicado 2021

Seasonal temperature, the lunar cycle and diurnal rhythms interact in a combinatorial manner to modulate genomic responses to the environment in a reef‐building coral

por Wuitchik, Daniel M., Wang, DongZhuo, Pells, Troy J., Karimi, Kamran, Ward, Selina, Vize, Peter D.
Publicado 2019

Xenbase: a Xenopus biology and genomics resource

por Bowes, Jeff B., Snyder, Kevin A., Segerdell, Erik, Gibb, Ross, Jarabek, Chris, Noumen, Etienne, Pollet, Nicolas, Vize, Peter D.
Publicado 2008

Xenbase: gene expression and improved integration

por Bowes, Jeff B., Snyder, Kevin A., Segerdell, Erik, Jarabek, Chris J., Azam, Kenan, Zorn, Aaron M., Vize, Peter D.
Publicado 2010

The case for standardizing gene nomenclature in vertebrates

por McCarthy, Fiona M., Jones, Tamsin E. M., Kwitek, Anne E., Smith, Cynthia L., Vize, Peter D., Westerfield, Monte, Bruford, Elspeth A.
Publicado 2023

Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase

por Segerdell, Erik, Ponferrada, Virgilio G, James-Zorn, Christina, Burns, Kevin A, Fortriede, Joshua D, Dahdul, Wasila M, Vize, Peter D, Zorn, Aaron M
Publicado 2013

Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes

por Karpinka, J. Brad, Fortriede, Joshua D., Burns, Kevin A., James-Zorn, Christina, Ponferrada, Virgilio G., Lee, Jacqueline, Karimi, Kamran, Zorn, Aaron M., Vize, Peter D.
Publicado 2014

The Xenbase literature curation process

por Bowes, Jeff B., Snyder, Kevin A., James-Zorn, Christina, Ponferrada, Virgilio G., Jarabek, Chris J., Burns, Kevin A., Bhattacharyya, Bishnu, Zorn, Aaron M., Vize, Peter D.
Publicado 2013

Normal Table of Xenopus development: a new graphical resource

por Zahn, Natalya, James-Zorn, Christina, Ponferrada, Virgilio G., Adams, Dany S., Grzymkowski, Julia, Buchholz, Daniel R., Nascone-Yoder, Nanette M., Horb, Marko, Moody, Sally A., Vize, Peter D., Zorn, Aaron M.
Publicado 2022

Classifying domain-specific text documents containing ambiguous keywords

por Karimi, Kamran, Agalakov, Sergei, Telmer, Cheryl A, Beatman, Thomas R, Pells, Troy J, Arshinoff, Bradley I M, Ku, Carolyn J, Foley, Saoirse, Hinman, Veronica F, Ettensohn, Charles A, Vize, Peter D
Publicado 2021

Xenbase: expansion and updates of the Xenopus model organism database

por James-Zorn, Christina, Ponferrada, Virgilio G., Jarabek, Chris J., Burns, Kevin A., Segerdell, Erik J., Lee, Jacqueline, Snyder, Kevin, Bhattacharyya, Bishnu, Karpinka, J. Brad, Fortriede, Joshua, Bowes, Jeff B., Zorn, Aaron M., Vize, Peter D.
Publicado 2013

Xenbase: a genomic, epigenomic and transcriptomic model organism database

por Karimi, Kamran, Fortriede, Joshua D, Lotay, Vaneet S, Burns, Kevin A, Wang, Dong Zhou, Fisher, Malcom E, Pells, Troy J, James-Zorn, Christina, Wang, Ying, Ponferrada, V G, Chu, Stanley, Chaturvedi, Praneet, Zorn, Aaron M, Vize, Peter D
Publicado 2018

Xenbase: Facilitating the Use of Xenopus to Model Human Disease

por Nenni, Mardi J., Fisher, Malcolm E., James-Zorn, Christina, Pells, Troy J., Ponferrada, Virgilio, Chu, Stanley, Fortriede, Joshua D., Burns, Kevin A., Wang, Ying, Lotay, Vaneet S., Wang, Dong Zhou, Segerdell, Erik, Chaturvedi, Praneet, Karimi, Kamran, Vize, Peter D., Zorn, Aaron M.
Publicado 2019