AVIA: an interactive web-server for annotation, visualization and impact analysis of genomic variations

por Vuong, Hue, Stephens, Robert M, Volfovsky, Natalia
Publicado 2012

A clustering method for repeat analysis in DNA sequences

por Volfovsky, Natalia, Haas, Brian J, Salzberg, Steven L
Publicado 2001

GAP-Seq: a method for identification of DNA palindromes

por Yang, Hui, Volfovsky, Natalia, Rattray, Alison, Chen, Xiongfong, Tanaka, Hisashi, Strathern, Jeffrey
Publicado 2014

Damaging de novo mutations diminish motor skills in children on the autism spectrum

por Buja, Andreas, Volfovsky, Natalia, Krieger, Abba M., Lord, Catherine, Lash, Alex E., Wigler, Michael, Iossifov, Ivan
Publicado 2018

Genome and gene alterations by insertions and deletions in the evolution of human and chimpanzee chromosome 22

por Volfovsky, Natalia, Oleksyk, Taras K, Cruz, Kristine C, Truelove, Ann L, Stephens, Robert M, Smith, Michael W
Publicado 2009

MouseIndelDB: a database integrating genomic indel polymorphisms that distinguish mouse strains

por Akagi, Keiko, Stephens, Robert M., Li, Jingfeng, Evdokimov, Evgenji, Kuehn, Michael R., Volfovsky, Natalia, Symer, David E.
Publicado 2010

Robust classification of protein variation using structural modelling and large-scale data integration

por Baugh, Evan H., Simmons-Edler, Riley, Müller, Christian L., Alford, Rebecca F., Volfovsky, Natalia, Lash, Alex E., Bonneau, Richard
Publicado 2016

Non-B DB: a database of predicted non-B DNA-forming motifs in mammalian genomes

por Cer, Regina Z., Bruce, Kevin H., Mudunuri, Uma S., Yi, Ming, Volfovsky, Natalia, Luke, Brian T., Bacolla, Albino, Collins, Jack R., Stephens, Robert M.
Publicado 2011

Full-length messenger RNA sequences greatly improve genome annotation

por Haas, Brian J, Volfovsky, Natalia, Town, Christopher D, Troukhan, Maxim, Alexandrov, Nickolai, Feldmann, Kenneth A, Flavell, Richard B, White, Owen, Salzberg, Steven L
Publicado 2002

Introducing the non-B DNA Motif Search Tool (nBMST)

por Cer, Regina Z, Bruce, Kevin H, Donohue, Duncan E, Temiz, Alpay N, Bacolla, Albino, Mudunuri, Uma S, Yi, Ming, Volfovsky, Natalia, Luke, Brian T, Collins, Jack R, Stephens, Robert M
Publicado 2011

Analysis of 454 sequencing error rate, error sources, and artifact recombination for detection of Low-frequency drug resistance mutations in HIV-1 DNA

por Shao, Wei, Boltz, Valerie F, Spindler, Jonathan E, Kearney, Mary F, Maldarelli, Frank, Mellors, John W, Stewart, Claudia, Volfovsky, Natalia, Levitsky, Alexander, Stephens, Robert M, Coffin, John M
Publicado 2013

Mouse endogenous retroviruses can trigger premature transcriptional termination at a distance

por Li, Jingfeng, Akagi, Keiko, Hu, Yongjun, Trivett, Anna L., Hlynialuk, Christopher J.W., Swing, Deborah A., Volfovsky, Natalia, Morgan, Tamara C., Golubeva, Yelena, Stephens, Robert M., Smith, David E., Symer, David E.
Publicado 2012

Transcription signatures encoded by ultraconserved genomic regions in human prostate cancer

por Hudson, Robert S, Yi, Ming, Volfovsky, Natalia, Prueitt, Robyn L, Esposito, Dominic, Volinia, Stefano, Liu, Chang-Gong, Schetter, Aaron J, Van Roosbroeck, Katrien, Stephens, Robert M, Calin, George A, Croce, Carlo M, Ambs, Stefan
Publicado 2013

Non-B DB v2.0: a database of predicted non-B DNA-forming motifs and its associated tools

por Cer, Regina Z., Donohue, Duncan E., Mudunuri, Uma S., Temiz, Nuri A., Loss, Michael A., Starner, Nathan J., Halusa, Goran N., Volfovsky, Natalia, Yi, Ming, Luke, Brian T., Bacolla, Albino, Collins, Jack R., Stephens, Robert M.
Publicado 2013

Therapeutic potential of targeting microRNA‐10b in established intracranial glioblastoma: first steps toward the clinic

por Teplyuk, Nadiya M, Uhlmann, Erik J, Gabriely, Galina, Volfovsky, Natalia, Wang, Yang, Teng, Jian, Karmali, Priya, Marcusson, Eric, Peter, Merlene, Mohan, Athul, Kraytsberg, Yevgenya, Cialic, Ron, Chiocca, E Antonio, Godlewski, Jakub, Tannous, Bakhos, Krichevsky, Anna M
Publicado 2016

Guanine Holes Are Prominent Targets for Mutation in Cancer and Inherited Disease

por Bacolla, Albino, Temiz, Nuri A., Yi, Ming, Ivanic, Joseph, Cer, Regina Z., Donohue, Duncan E., Ball, Edward V., Mudunuri, Uma S., Wang, Guliang, Jain, Aklank, Volfovsky, Natalia, Luke, Brian T., Stephens, Robert M., Cooper, David N., Collins, Jack R., Vasquez, Karen M.
Publicado 2013

Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes

por Feliciano, Pamela, Zhou, Xueya, Astrovskaya, Irina, Turner, Tychele N., Wang, Tianyun, Brueggeman, Leo, Barnard, Rebecca, Hsieh, Alexander, Snyder, LeeAnne Green, Muzny, Donna M., Sabo, Aniko, Gibbs, Richard A., Eichler, Evan E., O’Roak, Brian J., Michaelson, Jacob J., Volfovsky, Natalia, Shen, Yufeng, Chung, Wendy K.
Publicado 2019

Gene network reconstruction reveals cell cycle and antiviral genes as major drivers of cervical cancer

por Mine, Karina L., Shulzhenko, Natalia, Yambartsev, Anatoly, Rochman, Mark, Sanson, Gerdine F. O., Lando, Malin, Varma, Sudhir, Skinner, Jeff, Volfovsky, Natalia, Deng, Tao, Brenna, Sylvia M. F., Carvalho, Carmen R. N., Ribalta, Julisa C. L., Bustin, Michael, Matzinger, Polly, Silva, Ismael D. C. G., Lyng, Heidi, Gerbase-DeLima, Maria, Morgun, Andrey
Publicado 2013

Integrating de novo and inherited variants in 42,607 autism cases identifies mutations in new moderate-risk genes

por Zhou, Xueya, Feliciano, Pamela, Shu, Chang, Wang, Tianyun, Astrovskaya, Irina, Hall, Jacob B., Obiajulu, Joseph U., Wright, Jessica R., Murali, Shwetha C., Xu, Simon Xuming, Brueggeman, Leo, Thomas, Taylor R., Marchenko, Olena, Fleisch, Christopher, Barns, Sarah D., Snyder, LeeAnne Green, Han, Bing, Chang, Timothy S., Turner, Tychele N., Harvey, William T., Nishida, Andrew, O’Roak, Brian J., Geschwind, Daniel H., Michaelson, Jacob J., Volfovsky, Natalia, Eichler, Evan E., Shen, Yufeng, Chung, Wendy K.
Publicado 2022