The HTS barcode checker pipeline, a tool for automated detection of illegally traded species from high-throughput sequencing data

by Lammers, Youri, Peelen, Tamara, Vos, Rutger A, Gravendeel, Barbara
Published 2014

Sixteenth-century tomatoes in Europe: who saw them, what they looked like, and where they came from

by van Andel, Tinde, Vos, Rutger A., Michels, Ewout, Stefanaki, Anastasia
Published 2022

Evolution of embryonic developmental period in the marine bird families Alcidae and Spheniscidae: roles for nutrition and predation?

by Hipfner, J Mark, Gorman, Kristen B, Vos, Rutger A, Joy, Jeffrey B
Published 2010

BIO::Phylo-phyloinformatic analysis using perl

by Vos, Rutger A, Caravas, Jason, Hartmann, Klaas, Jensen, Mark A, Miller, Chase
Published 2011

Evolutionary dynamics of mycorrhizal symbiosis in land plant diversification

by Feijen, Frida A. A., Vos, Rutger A., Nuytinck, Jorinde, Merckx, Vincent S. F. T.
Published 2018

Advancing data reuse in phyloinformatics using an ontology-driven Semantic Web approach

by Panahiazar, Maryam, Sheth, Amit P, Ranabahu, Ajith, Vos, Rutger A, Leebens-Mack, Jim
Published 2013

Symbiont switching and trophic mode shifts in Orchidaceae

by Wang, Deyi, Jacquemyn, Hans, Gomes, Sofia I. F., Vos, Rutger A., Merckx, Vincent S. F. T.
Published 2021

Organic matter reduces the amount of detectable environmental DNA in freshwater

by van Bochove, Kees, Bakker, Freek T., Beentjes, Kevin K., Hemerik, Lia, Vos, Rutger A., Gravendeel, Barbara
Published 2020

phylotaR: An Automated Pipeline for Retrieving Orthologous DNA Sequences from GenBank in R

by Bennett, Dominic J., Hettling, Hannes, Silvestro, Daniele, Zizka, Alexander, Bacon, Christine D., Faurby, Søren, Vos, Rutger A., Antonelli, Alexandre
Published 2018

Sharing and re-use of phylogenetic trees (and associated data) to facilitate synthesis

by Stoltzfus, Arlin, O'Meara, Brian, Whitacre, Jamie, Mounce, Ross, Gillespie, Emily L, Kumar, Sudhir, Rosauer, Dan F, Vos, Rutger A
Published 2012

Refining bulk segregant analyses: ontology-mediated discovery of flowering time genes in Brassica oleracea

by Vos, Rutger A., van der Veen-van Wijk, Catharina A. M., Schranz, M. Eric, Vrieling, Klaas, Klinkhamer, Peter G. L., Lens, Frederic
Published 2022

NeXML: Rich, Extensible, and Verifiable Representation of Comparative Data and Metadata

by Vos, Rutger A., Balhoff, James P., Caravas, Jason A., Holder, Mark T., Lapp, Hilmar, Maddison, Wayne P., Midford, Peter E., Priyam, Anurag, Sukumaran, Jeet, Xia, Xuhua, Stoltzfus, Arlin
Published 2012

Scalariform-to-simple transition in vessel perforation plates triggered by differences in climate during the evolution of Adoxaceae

by Lens, Frederic, Vos, Rutger A., Charrier, Guillaume, van der Niet, Timo, Merckx, Vincent, Baas, Pieter, Aguirre Gutierrez, Jesus, Jacobs, Bart, Chacon Dória, Larissa, Smets, Erik, Delzon, Sylvain, Janssens, Steven B.
Published 2016

The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants

by Hoehndorf, Robert, Alshahrani, Mona, Gkoutos, Georgios V., Gosline, George, Groom, Quentin, Hamann, Thomas, Kattge, Jens, de Oliveira, Sylvia Mota, Schmidt, Marco, Sierra, Soraya, Smets, Erik, Vos, Rutger A., Weiland, Claus
Published 2016

Toward a Self-Updating Platform for Estimating Rates of Speciation and Migration, Ages, and Relationships of Taxa

by Antonelli, Alexandre, Hettling, Hannes, Condamine, Fabien L., Vos, Karin, Nilsson, R. Henrik, Sanderson, Michael J., Sauquet, Hervé, Scharn, Ruud, Silvestro, Daniele, Töpel, Mats, Bacon, Christine D., Oxelman, Bengt, Vos, Rutger A.
Published 2017

Exploring the evolutionary origin of floral organs of Erycina pusilla, an emerging orchid model system

by Dirks-Mulder, Anita, Butôt, Roland, van Schaik, Peter, Wijnands, Jan Willem P. M., van den Berg, Roel, Krol, Louie, Doebar, Sadhana, van Kooperen, Kelly, de Boer, Hugo, Kramer, Elena M., Smets, Erik F., Vos, Rutger A., Vrijdaghs, Alexander, Gravendeel, Barbara
Published 2017

Incorporation of an invasive plant into a native insect herbivore food web

by Schilthuizen, Menno, Santos Pimenta, Lúcia P., Lammers, Youri, Steenbergen, Peter J., Flohil, Marco, Beveridge, Nils G.P., van Duijn, Pieter T., Meulblok, Marjolein M., Sosef, Nils, van de Ven, Robin, Werring, Ralf, Beentjes, Kevin K., Meijer, Kim, Vos, Rutger A., Vrieling, Klaas, Gravendeel, Barbara, Choi, Young, Verpoorte, Robert, Smit, Chris, Beukeboom, Leo W.
Published 2016

Species-Level Para- and Polyphyly in DNA Barcode Gene Trees: Strong Operational Bias in European Lepidoptera

by Mutanen, Marko, Kivelä, Sami M., Vos, Rutger A., Doorenweerd, Camiel, Ratnasingham, Sujeevan, Hausmann, Axel, Huemer, Peter, Dincă, Vlad, van Nieukerken, Erik J., Lopez-Vaamonde, Carlos, Vila, Roger, Aarvik, Leif, Decaëns, Thibaud, Efetov, Konstantin A., Hebert, Paul D. N., Johnsen, Arild, Karsholt, Ole, Pentinsaari, Mikko, Rougerie, Rodolphe, Segerer, Andreas, Tarmann, Gerhard, Zahiri, Reza, Godfray, H. Charles J.
Published 2016

The 2006 NESCent Phyloinformatics Hackathon: A Field Report

by Lapp, Hilmar, Bala, Sendu, Balhoff, James P., Bouck, Amy, Goto, Naohisa, Holder, Mark, Holland, Richard, Holloway, Alisha, Katayama, Toshiaki, Lewis, Paul O., Mackey, Aaron J., Osborne, Brian I., Piel, William H., Kosakovsky Pond, Sergei L., Poon, Art F.Y., Qiu, Wei-Gang, Stajich, Jason E., Stoltzfus, Arlin, Thierer, Tobias, Vilella, Albert J., Vos, Rutger A., Zmasek, Christian M., Zwickl, Derrick J., Vision, Todd J.
Published 2007

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

by Katayama, Toshiaki, Arakawa, Kazuharu, Nakao, Mitsuteru, Ono, Keiichiro, Aoki-Kinoshita, Kiyoko F, Yamamoto, Yasunori, Yamaguchi, Atsuko, Kawashima, Shuichi, Chun, Hong-Woo, Aerts, Jan, Aranda, Bruno, Barboza, Lord Hendrix, Bonnal, Raoul JP, Bruskiewich, Richard, Bryne, Jan C, Fernández, José M, Funahashi, Akira, Gordon, Paul MK, Goto, Naohisa, Groscurth, Andreas, Gutteridge, Alex, Holland, Richard, Kano, Yoshinobu, Kawas, Edward A, Kerhornou, Arnaud, Kibukawa, Eri, Kinjo, Akira R, Kuhn, Michael, Lapp, Hilmar, Lehvaslaiho, Heikki, Nakamura, Hiroyuki, Nakamura, Yasukazu, Nishizawa, Tatsuya, Nobata, Chikashi, Noguchi, Tamotsu, Oinn, Thomas M, Okamoto, Shinobu, Owen, Stuart, Pafilis, Evangelos, Pocock, Matthew, Prins, Pjotr, Ranzinger, René, Reisinger, Florian, Salwinski, Lukasz, Schreiber, Mark, Senger, Martin, Shigemoto, Yasumasa, Standley, Daron M, Sugawara, Hideaki, Tashiro, Toshiyuki, Trelles, Oswaldo, Vos, Rutger A, Wilkinson, Mark D, York, William, Zmasek, Christian M, Asai, Kiyoshi, Takagi, Toshihisa
Published 2010