DeepRibo: a neural network for precise gene annotation of prokaryotes by combining ribosome profiling signal and binding site patterns

por Clauwaert, Jim, Menschaert, Gerben, Waegeman, Willem
Publicado 2019

Explainability in transformer models for functional genomics

por Clauwaert, Jim, Menschaert, Gerben, Waegeman, Willem
Publicado 2021

Flow Cytometric Single-Cell Identification of Populations in Synthetic Bacterial Communities

por Rubbens, Peter, Props, Ruben, Boon, Nico, Waegeman, Willem
Publicado 2017

Using structured pathology data to predict hospital-wide mortality at admission

por Deschepper, Mieke, Waegeman, Willem, Vogelaers, Dirk, Eeckloo, Kristof
Publicado 2020

Linear filtering reveals false negatives in species interaction data

por Stock, Michiel, Poisot, Timothée, Waegeman, Willem, De Baets, Bernard
Publicado 2017

Bacterial species identification using MALDI-TOF mass spectrometry and machine learning techniques: A large-scale benchmarking study

por Mortier, Thomas, Wieme, Anneleen D., Vandamme, Peter, Waegeman, Willem
Publicado 2021

CpG Transformer for imputation of single-cell methylomes

por De Waele, Gaetan, Clauwaert, Jim, Menschaert, Gerben, Waegeman, Willem
Publicado 2021

Effects of chlorhexidine gluconate oral care on hospital mortality: a hospital-wide, observational cohort study

por Deschepper, Mieke, Waegeman, Willem, Eeckloo, Kristof, Vogelaers, Dirk, Blot, Stijn
Publicado 2018

PhenoGMM: Gaussian Mixture Modeling of Cytometry Data Quantifies Changes in Microbial Community Structure

por Rubbens, Peter, Props, Ruben, Kerckhof, Frederiek-Maarten, Boon, Nico, Waegeman, Willem
Publicado 2021

From learning taxonomies to phylogenetic learning: Integration of 16S rRNA gene data into FAME-based bacterial classification

por Slabbinck, Bram, Waegeman, Willem, Dawyndt, Peter, De Vos, Paul, De Baets, Bernard
Publicado 2010

Predicting the Presence and Abundance of Bacterial Taxa in Environmental Communities through Flow Cytometric Fingerprinting

por Heyse, Jasmine, Schattenberg, Florian, Rubbens, Peter, Müller, Susann, Waegeman, Willem, Boon, Nico, Props, Ruben
Publicado 2021

Predictive design of sigma factor-specific promoters

por Van Brempt, Maarten, Clauwaert, Jim, Mey, Friederike, Stock, Michiel, Maertens, Jo, Waegeman, Willem, De Mey, Marjan
Publicado 2020

Randomized Lasso Links Microbial Taxa with Aquatic Functional Groups Inferred from Flow Cytometry

por Rubbens, Peter, Schmidt, Marian L., Props, Ruben, Biddanda, Bopaiah A., Boon, Nico, Waegeman, Willem, Denef, Vincent J.
Publicado 2019

miSTAR: miRNA target prediction through modeling quantitative and qualitative miRNA binding site information in a stacked model structure

por Van Peer, Gert, De Paepe, Ayla, Stock, Michiel, Anckaert, Jasper, Volders, Pieter-Jan, Vandesompele, Jo, De Baets, Bernard, Waegeman, Willem
Publicado 2017