Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

por Misra, Vikram A., Wafula, Eric K., Wang, Yu, dePamphilis, Claude W., Timko, Michael P.
Publicado 2019

SHR4z, a novel decoy effector from the haustorium of the parasitic weed Striga gesnerioides, suppresses host plant immunity

por Su, Chun, Liu, Hai, Wafula, Eric K., Honaas, Loren, de Pamphilis, Claude W., Timko, Michael P.
Publicado 2019

PlantTribes2: Tools for comparative gene family analysis in plant genomics

por Wafula, Eric K., Zhang, Huiting, Von Kuster, Gregory, Leebens-Mack, James H., Honaas, Loren A., dePamphilis, Claude W.
Publicado 2023

Building a foundation for gene family analysis in Rosaceae genomes with a novel workflow: A case study in Pyrus architecture genes

por Zhang, Huiting, Wafula, Eric K., Eilers, Jon, Harkess, Alex E., Ralph, Paula E., Timilsena, Prakash Raj, dePamphilis, Claude W., Waite, Jessica M., Honaas, Loren A.
Publicado 2022

Single-Copy Nuclear Genes Place Haustorial Hydnoraceae within Piperales and Reveal a Cretaceous Origin of Multiple Parasitic Angiosperm Lineages

por Naumann, Julia, Salomo, Karsten, Der, Joshua P., Wafula, Eric K., Bolin, Jay F., Maass, Erika, Frenzke, Lena, Samain, Marie-Stéphanie, Neinhuis, Christoph, dePamphilis, Claude W., Wanke, Stefan
Publicado 2013

Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome

por Honaas, Loren A., Wafula, Eric K., Wickett, Norman J., Der, Joshua P., Zhang, Yeting, Edger, Patrick P., Altman, Naomi S., Pires, J. Chris, Leebens-Mack, James H., dePamphilis, Claude W.
Publicado 2016

Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Parasitic Plant Hydnora visseri (Hydnoraceae)

por Naumann, Julia, Der, Joshua P., Wafula, Eric K., Jones, Samuel S., Wagner, Sarah T., Honaas, Loren A., Ralph, Paula E., Bolin, Jay F., Maass, Erika, Neinhuis, Christoph, Wanke, Stefan, dePamphilis, Claude W.
Publicado 2016

Functional genomics of a generalist parasitic plant: Laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression

por Honaas, Loren A, Wafula, Eric K, Yang, Zhenzhen, Der, Joshua P, Wickett, Norman J, Altman, Naomi S, Taylor, Christopher G, Yoder, John I, Timko, Michael P, Westwood, James H, dePamphilis, Claude W
Publicado 2013

Evolution of a horizontally acquired legume gene, albumin 1, in the parasitic plant Phelipanche aegyptiaca and related species

por Zhang, Yeting, Fernandez-Aparicio, Monica, Wafula, Eric K, Das, Malay, Jiao, Yuannian, Wickett, Norman J, Honaas, Loren A, Ralph, Paula E, Wojciechowski, Martin F, Timko, Michael P, Yoder, John I, Westwood, James H, dePamphilis, Claude W
Publicado 2013

Comparative Transcriptome Analyses Reveal Core Parasitism Genes and Suggest Gene Duplication and Repurposing as Sources of Structural Novelty

por Yang, Zhenzhen, Wafula, Eric K., Honaas, Loren A., Zhang, Huiting, Das, Malay, Fernandez-Aparicio, Monica, Huang, Kan, Bandaranayake, Pradeepa C.G., Wu, Biao, Der, Joshua P., Clarke, Christopher R., Ralph, Paula E., Landherr, Lena, Altman, Naomi S., Timko, Michael P., Yoder, John I., Westwood, James H., dePamphilis, Claude W.
Publicado 2015

Phylotranscriptomic Analyses of Mycoheterotrophic Monocots Show a Continuum of Convergent Evolutionary Changes in Expressed Nuclear Genes From Three Independent Nonphotosynthetic L...

por Timilsena, Prakash Raj, Barrett, Craig F, Piñeyro-Nelson, Alma, Wafula, Eric K, Ayyampalayam, Saravanaraj, McNeal, Joel R, Yukawa, Tomohisa, Givnish, Thomas J, Graham, Sean W, Pires, J Chris, Davis, Jerrold I, Ané, Cécile, Stevenson, Dennis W, Leebens-Mack, Jim, Martínez-Salas, Esteban, Álvarez-Buylla, Elena R, dePamphilis, Claude W
Publicado 2022

Phylogenomic resolution of order- and family-level monocot relationships using 602 single-copy nuclear genes and 1375 BUSCO genes

por Timilsena, Prakash Raj, Wafula, Eric K., Barrett, Craig F., Ayyampalayam, Saravanaraj, McNeal, Joel R., Rentsch, Jeremy D., McKain, Michael R., Heyduk, Karolina, Harkess, Alex, Villegente, Matthieu, Conran, John G., Illing, Nicola, Fogliani, Bruno, Ané, Cécile, Pires, J. Chris, Davis, Jerrold I., Zomlefer, Wendy B., Stevenson, Dennis W., Graham, Sean W., Givnish, Thomas J., Leebens-Mack, James, dePamphilis, Claude W.
Publicado 2022