AlphaPeptDeep: a modular deep learning framework to predict peptide properties for proteomics

por Zeng, Wen-Feng, Zhou, Xie-Xuan, Willems, Sander, Ammar, Constantin, Wahle, Maria, Bludau, Isabell, Voytik, Eugenia, Strauss, Maximillian T., Mann, Matthias
Publicado 2022

Synchro-PASEF Allows Precursor-Specific Fragment Ion Extraction and Interference Removal in Data-Independent Acquisition

por Skowronek, Patricia, Krohs, Florian, Lubeck, Markus, Wallmann, Georg, Itang, Ericka C.M., Koval, Polina, Wahle, Maria, Thielert, Marvin, Meier, Florian, Willems, Sander, Raether, Oliver, Mann, Matthias
Publicado 2022

Spatial single-cell mass spectrometry defines zonation of the hepatocyte proteome

por Rosenberger, Florian A., Thielert, Marvin, Strauss, Maximilian T., Schweizer, Lisa, Ammar, Constantin, Mädler, Sophia C., Metousis, Andreas, Skowronek, Patricia, Wahle, Maria, Madden, Katherine, Gote-Schniering, Janine, Semenova, Anna, Schiller, Herbert B., Rodriguez, Edwin, Nordmann, Thierry M., Mund, Andreas, Mann, Matthias
Publicado 2023

Robust dimethyl‐based multiplex‐DIA doubles single‐cell proteome depth via a reference channel

por Thielert, Marvin, Itang, Ericka CM, Ammar, Constantin, Rosenberger, Florian A, Bludau, Isabell, Schweizer, Lisa, Nordmann, Thierry M, Skowronek, Patricia, Wahle, Maria, Zeng, Wen‐Feng, Zhou, Xie‐Xuan, Brunner, Andreas‐David, Richter, Sabrina, Levesque, Mitchell P, Theis, Fabian J, Steger, Martin, Mann, Matthias
Publicado 2023

PAX8 and MECOM are interaction partners driving ovarian cancer

por Bleu, Melusine, Mermet-Meillon, Fanny, Apfel, Verena, Barys, Louise, Holzer, Laura, Bachmann Salvy, Marianne, Lopes, Rui, Amorim Monteiro Barbosa, Inês, Delmas, Cecile, Hinniger, Alexandra, Chau, Suzanne, Kaufmann, Markus, Haenni, Simon, Berneiser, Karolin, Wahle, Maria, Moravec, Ivana, Vissières, Alexandra, Poetsch, Tania, Ahrné, Erik, Carte, Nathalie, Voshol, Johannes, Bechter, Elisabeth, Hamon, Jacques, Meyerhofer, Marco, Erdmann, Dirk, Fischer, Matteo, Stachyra, Therese, Freuler, Felix, Gutmann, Sascha, Fernández, César, Schmelzle, Tobias, Naumann, Ulrike, Roma, Guglielmo, Lawrenson, Kate, Nieto-Oberhuber, Cristina, Cobos-Correa, Amanda, Ferretti, Stephane, Schübeler, Dirk, Galli, Giorgio Giacomo
Publicado 2021