A Comparison of Lossless Compression Methods in Microscopy Data Storage Applications

por Walker, Logan A., McGlothlin, Maggie, Li, Ye, Cai, Dawen
Publicado 2023

Light microscopy based approach for mapping connectivity with molecular specificity

por Shen, Fred Y., Harrington, Margaret M., Walker, Logan A., Cheng, Hon Pong Jimmy, Boyden, Edward S., Cai, Dawen
Publicado 2020

The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis

por Michki, Nigel S., Li, Ye, Sanjasaz, Kayvon, Zhao, Yimeng, Shen, Fred Y., Walker, Logan A., Cao, Wenjia, Lee, Cheng-Yu, Cai, Dawen
Publicado 2021

Post-explant profiling of subcellular-scale carbon fiber intracortical electrodes and surrounding neurons enables modeling of recorded electrophysiology

por Letner, Joseph G, Patel, Paras R, Hsieh, Jung-Chien, Smith Flores, Israel M, della Valle, Elena, Walker, Logan A, Weiland, James D, Chestek, Cynthia A, Cai, Dawen
Publicado 2023

CLEAR: coverage-based limiting-cell experiment analysis for RNA-seq

por Walker, Logan A., Sovic, Michael G., Chiang, Chi-Ling, Hu, Eileen, Denninger, Jiyeon K., Chen, Xi, Kirby, Elizabeth D., Byrd, John C., Muthusamy, Natarajan, Bundschuh, Ralf, Yan, Pearlly
Publicado 2020

Bitbow Enables Highly Efficient Neuronal Lineage Tracing and Morphology Reconstruction in Single Drosophila Brains

por Li, Ye, Walker, Logan A., Zhao, Yimeng, Edwards, Erica M., Michki, Nigel S., Cheng, Hon Pong Jimmy, Ghazzi, Marya, Chen, Tiffany Y., Chen, Maggie, Roossien, Douglas H., Cai, Dawen
Publicado 2021

Robust Transcriptional Profiling and Identification of Differentially Expressed Genes With Low Input RNA Sequencing of Adult Hippocampal Neural Stem and Progenitor Populations

por Denninger, Jiyeon K., Walker, Logan A., Chen, Xi, Turkoglu, Altan, Pan, Alex, Tapp, Zoe, Senthilvelan, Sakthi, Rindani, Raina, Kokiko-Cochran, Olga N., Bundschuh, Ralf, Yan, Pearlly, Kirby, Elizabeth D.
Publicado 2022

Whole Transcriptome Analysis of Renal Intercalated Cells Predicts Lipopolysaccharide Mediated Inhibition of Retinoid X Receptor alpha Function

por Saxena, Vijay, Fitch, James, Ketz, John, White, Peter, Wetzel, Amy, Chanley, Melinda A., Spencer, John D., Becknell, Brian, Pierce, Keith R., Arregui, Sam W., Nelson, Raoul D., Schwartz, George J., Velazquez, Victoria, Walker, Logan A., Chen, Xi, Yan, Pearlly, Hains, David S., Schwaderer, Andrew L.
Publicado 2019

Publisher Correction: Whole Transcriptome Analysis of Renal Intercalated Cells Predicts Lipopolysaccharide Mediated Inhibition of Retinoid X Receptor alpha Function

por Saxena, Vijay, Fitch, James, Ketz, John, White, Peter, Wetzel, Amy, Chanley, Melinda A., Spencer, John D., Becknell, Brian, Pierce, Keith R., Arregui, Sam W., Nelson, Raoul D., Schwartz, George J., Velazquez, Victoria, Walker, Logan A., Chen, Xi, Yan, Pearlly, Hains, David S., Schwaderer, Andrew L.
Publicado 2020

Teaching Python for Data Science: Collaborative development of a modular & interactive curriculum

por Duda, Marlena, Sovacool, Kelly L., Farzaneh, Negar, Nguyen, Vy Kim, Haynes, Sarah E., Falk, Hayley, Furman, Katherine L., Walker, Logan A., Diao, Rucheng, Oneka, Morgan, Drotos, Audrey C., Woloshin, Alana, Dotson, Gabrielle A., Kriebel, April, Meng, Lucy, Thiede, Stephanie N., Lapp, Zena, Wolford, Brooke N.
Publicado 2021

PP2A is a therapeutically targetable driver of cell fate decisions via a c-Myc/p21 axis in human and murine acute myeloid leukemia

por Goswami, Swagata, Mani, Rajeswaran, Nunes, Jessica, Chiang, Chi-Ling, Zapolnik, Kevan, Hu, Eileen, Frissora, Frank, Mo, Xiaokui, Walker, Logan A., Yan, Pearlly, Bundschuh, Ralf, Beaver, Larry, Devine, Raymond, Tsai, Yo-Ting, Ventura, Ann, Xie, Zhiliang, Chen, Min, Lapalombella, Rosa, Walker, Alison, Mims, Alice, Larkin, Karilyn, Grieselhuber, Nicole, Bennett, Chad, Phelps, Mitch, Hertlein, Erin, Behbehani, Gregory, Vasu, Sumithira, Byrd, John C., Muthusamy, Natarajan
Publicado 2022

Genome-wide DNA hypermethylation opposes healing in patients with chronic wounds by impairing epithelial-mesenchymal transition

por Singh, Kanhaiya, Rustagi, Yashika, Abouhashem, Ahmed S., Tabasum, Saba, Verma, Priyanka, Hernandez, Edward, Pal, Durba, Khona, Dolly K., Mohanty, Sujit K., Kumar, Manishekhar, Srivastava, Rajneesh, Guda, Poornachander R., Verma, Sumit S., Mahajan, Sanskruti, Killian, Jackson A., Walker, Logan A., Ghatak, Subhadip, Mathew-Steiner, Shomita S., Wanczyk, Kristen E., Liu, Sheng, Wan, Jun, Yan, Pearlly, Bundschuh, Ralf, Khanna, Savita, Gordillo, Gayle M., Murphy, Michael P., Roy, Sashwati, Sen, Chandan K.
Publicado 2022