Analytical Verification Performance of Afirma Genomic Sequencing Classifier in the Diagnosis of Cytologically Indeterminate Thyroid Nodules

por Hao, Yangyang, Choi, Yoonha, Babiarz, Joshua E., Kloos, Richard T., Kennedy, Giulia C., Huang, Jing, Walsh, P. Sean
Publicado 2019

Impacts of the COVID-19 pandemic on the breast cancer control pathway in Ireland

por Tierney, P A, McDevitt, J, Brennan, A, Zhang, M, Mullooly, M, Bennett, K, Walsh, P M, Murray, D
Publicado 2023

Analysis of the aetiology of epilepsy in 3,216 adult patients attending a tertiary referral center enabled by an electronic patient record

por Delaney, S, Fitzsimons, M, White, M, Power, K, O' Donoghue, S, Kilbride, R, Widdess-Walsh, P, El Naggar, H, Delanty, N
Publicado 2020

Maximizing Small Biopsy Patient Samples: Unified RNA-Seq Platform Assessment of over 120,000 Patient Biopsies

por Walsh, P. Sean, Hao, Yangyang, Ding, Jie, Qu, Jianghan, Wilde, Jonathan, Jiang, Ruochen, Kloos, Richard T., Huang, Jing, Kennedy, Giulia C.
Publicado 2022

Draft Genome Sequences of Six Different Staphylococcus epidermidis Clones, Isolated Individually from Preterm Neonates Presenting with Sepsis at Edinburgh’s Royal Infirmary

por Walsh, P., Bekaert, M., Carroll, J., Manning, T., Kelly, B., O’Driscoll, A., Lu, X., Smith, C., Dickinson, P., Templeton, K., Ghazal, P., Sleator, R. D.
Publicado 2015

Draft Genome Sequence of a Streptococcus agalactiae Strain Isolated from a Preterm Neonate Blood Sepsis Patient at the Royal Infirmary, Edinburgh, Scotland

por Kropp, K. A., Lucid, A., Carroll, J., Belgrudov, V., Walsh, P., Kelly, B., Smith, C., Dickinson, P., O’Driscoll, A., Templeton, K., Ghazal, P., Sleator, R. D.
Publicado 2014

Draft Genome Sequence of a Staphylococcus warneri Strain Isolated from a Preterm Neonate Blood Sepsis Patient at the Royal Infirmary, Edinburgh, Scotland

por Kropp, K. A., Lucid, A., Carroll, J., Belgrudov, V., Walsh, P., Kelly, B., Smith, C., Dickinson, P., O’Driscoll, A., Templeton, K., Ghazal, P., Sleator, R. D.
Publicado 2014

Draft Genome Sequence of a Pantoea sp. Isolated from a Preterm Neonatal Blood Sepsis Patient

por Kropp, K. A., Lucid, A., Carroll, J., Belgrudov, V., Walsh, P., Kelly, B., Templeton, K., Smith, C., Dickinson, P., O’Driscoll, A., Ghazal, P., Sleator, R. D.
Publicado 2014

Draft Genome Sequence of a Staphylococcus aureus Isolate Taken from the Blood of a Preterm Neonatal Blood Sepsis Patient

por Kropp, K. A., Lucid, A., Carroll, J., Belgrudov, V., Walsh, P., Kelly, B., Templeton, K., Smith, C., Dickinson, P., O’Driscoll, A., Ghazal, P., Sleator, R. D.
Publicado 2014

Draft Genome Sequence of an Enterococcus faecalis Strain Isolated from a Neonatal Blood Sepsis Patient

por Kropp, K. A., Lucid, A., Carroll, J., Belgrudov, V., Walsh, P., Kelly, B., Smith, C., Dickinson, P., O’Driscoll, A., Templeton, K., Ghazal, P., Sleator, R. D.
Publicado 2014

Draft Genome Sequence of a Serratia marcescens Strain Isolated from a Preterm Neonatal Blood Sepsis Patient at the Royal Infirmary, Edinburgh, Scotland, United Kingdom

por Kropp, K. A., Lucid, A., Carroll, J., Belgrudov, V., Walsh, P., Kelly, B., Smith, C., Dickinson, P., O’Driscoll, A., Templeton, K., Ghazal, P., Sleator, R. D.
Publicado 2014

Identification of usual interstitial pneumonia pattern using RNA-Seq and machine learning: challenges and solutions

por Choi, Yoonha, Liu, Tiffany Ting, Pankratz, Daniel G., Colby, Thomas V., Barth, Neil M., Lynch, David A., Walsh, P. Sean, Raghu, Ganesh, Kennedy, Giulia C., Huang, Jing
Publicado 2018

MON-LB097 The Genomic Landscape of Preoperative FNAs Positive for the Afirma GSC Medullary Thyroid Cancer Classifier

por Waguespack, Steven, Busaidy, Naifa, Hu, Mimi, Grubbs, Elizabeth, Weitzman, Steven, Wirth, Lori, Zafereo, Mark, Babiarz, Joshua, Hao, Yangyang, Huang, Jing, Kennedy, Giulia, Walsh, P. Sean, Kloos, Richard
Publicado 2019

Hereditary prostate cancer in African American families: linkage analysis using markers that map to five candidate susceptibility loci

por Brown, W M, Lange, E M, Chen, H, Zheng, S L, Chang, B, Wiley, K E, Isaacs, S D, Walsh, P C, Isaacs, W B, Xu, J, Cooney, K A
Publicado 2004

Analytical performance of a bronchial genomic classifier

por Hu, Zhanzhi, Whitney, Duncan, Anderson, Jessica R., Cao, Manqiu, Ho, Christine, Choi, Yoonha, Huang, Jing, Frink, Robert, Smith, Kate Porta, Monroe, Robert, Kennedy, Giulia C., Walsh, P. Sean
Publicado 2016

Polymorphisms in the CYP1B1 gene are associated with increased risk of prostate cancer

por Chang, B L, Zheng, S L, Isaacs, S D, Turner, A, Hawkins, G A, Wiley, K E, Bleecker, E R, Walsh, P C, Meyers, D A, Isaacs, W B, Xu, J
Publicado 2003

Identification of Hürthle cell cancers: solving a clinical challenge with genomic sequencing and a trio of machine learning algorithms

por Hao, Yangyang, Duh, Quan-Yang, Kloos, Richard T., Babiarz, Joshua, Harrell, R. Mack, Traweek, S. Thomas, Kim, Su Yeon, Fedorowicz, Grazyna, Walsh, P. Sean, Sadow, Peter M., Huang, Jing, Kennedy, Giulia C.
Publicado 2019

Analytical validation of the Percepta genomic sequencing classifier; an RNA next generation sequencing assay for the assessment of Lung Cancer risk of suspicious pulmonary nodules

por Johnson, Marla K., Wu, Shuyang, Pankratz, Daniel G., Fedorowicz, Grazyna, Anderson, Jessica, Ding, Jie, Wong, Mei, Cao, Manqiu, Babiarz, Joshua, Lofaro, Lori, Walsh, P. Sean, Kennedy, Giulia C., Huang, Jing
Publicado 2021

The diagnostic application of RNA sequencing in patients with thyroid cancer: an analysis of 851 variants and 133 fusions in 524 genes

por Pagan, Moraima, Kloos, Richard T., Lin, Chu-Fang, Travers, Kevin J., Matsuzaki, Hajime, Tom, Ed Y., Kim, Su Yeon, Wong, Mei G., Stewart, Andrew C., Huang, Jing, Walsh, P. Sean, Monroe, Robert J., Kennedy, Giulia C.
Publicado 2016

Analytical and Clinical Validation of Expressed Variants and Fusions From the Whole Transcriptome of Thyroid FNA Samples

por Angell, Trevor E., Wirth, Lori J., Cabanillas, Maria E., Shindo, Maisie L., Cibas, Edmund S., Babiarz, Joshua E., Hao, Yangyang, Kim, Su Yeon, Walsh, P. Sean, Huang, Jing, Kloos, Richard T., Kennedy, Giulia C., Waguespack, Steven G.
Publicado 2019