A fully featured COMBINE archive of a simulation study on syncytial mitotic cycles in Drosophila embryos

por Scharm, Martin, Waltemath, Dagmar
Publicado 2016

Combining computational models, semantic annotations and simulation experiments in a graph database

por Henkel, Ron, Wolkenhauer, Olaf, Waltemath, Dagmar
Publicado 2015

An algorithm to detect and communicate the differences in computational models describing biological systems

por Scharm, Martin, Wolkenhauer, Olaf, Waltemath, Dagmar
Publicado 2016

COMODI: an ontology to characterise differences in versions of computational models in biology

por Scharm, Martin, Waltemath, Dagmar, Mendes, Pedro, Wolkenhauer, Olaf
Publicado 2016

Quick tips for creating effective and impactful biological pathways using the Systems Biology Graphical Notation

por Touré, Vasundra, Le Novère, Nicolas, Waltemath, Dagmar, Wolkenhauer, Olaf
Publicado 2018

Initiatives, Concepts, and Implementation Practices of the Findable, Accessible, Interoperable, and Reusable Data Principles in Health Data Stewardship: Scoping Review

por Inau, Esther Thea, Sack, Jean, Waltemath, Dagmar, Zeleke, Atinkut Alamirrew
Publicado 2023

Guidelines and Standard Frameworks for AI in Medicine: Protocol for a Systematic Literature Review

por Shiferaw, Kirubel Biruk, Roloff, Moritz, Waltemath, Dagmar, Zeleke, Atinkut Alamirrew
Publicado 2023

Annotation-based feature extraction from sets of SBML models

por Alm, Rebekka, Waltemath, Dagmar, Wolfien, Markus, Wolkenhauer, Olaf, Henkel, Ron
Publicado 2015

Initiatives, Concepts, and Implementation Practices of FAIR (Findable, Accessible, Interoperable, and Reusable) Data Principles in Health Data Stewardship Practice: Protocol for a...

por Inau, Esther Thea, Sack, Jean, Waltemath, Dagmar, Zeleke, Atinkut Alamirrew
Publicado 2021

Exploring the evolution of biochemical models at the network level

por Gebhardt, Tom, Touré, Vasundra, Waltemath, Dagmar, Wolkenhauer, Olaf, Scharm, Martin
Publicado 2022

Ranked retrieval of Computational Biology models

por Henkel, Ron, Endler, Lukas, Peters, Andre, Le Novère, Nicolas, Waltemath, Dagmar
Publicado 2010

The Status of Data Management Practices Across German Medical Data Integration Centers: Mixed Methods Study

por Gierend, Kerstin, Freiesleben, Sherry, Kadioglu, Dennis, Siegel, Fabian, Ganslandt, Thomas, Waltemath, Dagmar
Publicado 2023

Notions of similarity for systems biology models

por Henkel, Ron, Hoehndorf, Robert, Kacprowski, Tim, Knüpfer, Christian, Liebermeister, Wolfram, Waltemath, Dagmar
Publicado 2016

Notions of similarity for systems biology models

por Henkel, Ron, Hoehndorf, Robert, Kacprowski, Tim, Knüpfer, Christian, Liebermeister, Wolfram, Waltemath, Dagmar
Publicado 2017

Identifying frequent patterns in biochemical reaction networks: a workflow

por Lambusch, Fabienne, Waltemath, Dagmar, Wolkenhauer, Olaf, Sandkuhl, Kurt, Rosenke, Christian, Henkel, Ron
Publicado 2018

Open modeling and exchange (OMEX) metadata specification version 1.0

por Neal, Maxwell L., Gennari, John H., Waltemath, Dagmar, Nickerson, David P., König, Matthias
Publicado 2020

Approaches and Criteria for Provenance in Biomedical Data Sets and Workflows: Protocol for a Scoping Review

por Gierend, Kerstin, Krüger, Frank, Waltemath, Dagmar, Fünfgeld, Maximilian, Ganslandt, Thomas, Zeleke, Atinkut Alamirrew
Publicado 2021

Evolution of computational models in BioModels Database and the Physiome Model Repository

por Scharm, Martin, Gebhardt, Tom, Touré, Vasundra, Bagnacani, Andrea, Salehzadeh-Yazdi, Ali, Wolkenhauer, Olaf, Waltemath, Dagmar
Publicado 2018

OMEX metadata specification (version 1.2)

por Gennari, John H., König, Matthias, Misirli, Goksel, Neal, Maxwell L., Nickerson, David P., Waltemath, Dagmar
Publicado 2021

STON: exploring biological pathways using the SBGN standard and graph databases

por Touré, Vasundra, Mazein, Alexander, Waltemath, Dagmar, Balaur, Irina, Saqi, Mansoor, Henkel, Ron, Pellet, Johann, Auffray, Charles
Publicado 2016