Complete Genome Sequence of Enterococcus durans Oregon-R-modENCODE Strain BDGP3, a Lactic Acid Bacterium Found in the Drosophila melanogaster Gut

por Wan, Kenneth H., Yu, Charles, Park, Soo, Hammonds, Ann S., Booth, Benjamin W., Celniker, Susan E.
Publicado 2017

Complete Genome Sequence of Bacillus kochii Oregon-R-modENCODE Strain BDGP4, Isolated from Drosophila melanogaster Gut

por Wan, Kenneth H., Yu, Charles, Park, Soo, Hammonds, Ann S., Booth, Benjamin W., Celniker, Susan E.
Publicado 2017

Complete Genome Sequence of Lactobacillus plantarum Oregon-R-modENCODE Strain BDGP2 Isolated from Drosophila melanogaster Gut

por Wan, Kenneth H., Yu, Charles, Park, Soo, Hammonds, Ann S., Booth, Benjamin W., Celniker, Susan E.
Publicado 2017

Complete Genome Sequence of Acetobacter tropicalis Oregon-R-modENCODE Strain BDGP1, an Acetic Acid Bacterium Found in the Drosophila melanogaster Gut

por Wan, Kenneth H., Yu, Charles, Park, Soo, Hammonds, Ann S., Booth, Benjamin W., Celniker, Susan E.
Publicado 2017

Complete Genome Sequence of Acetobacter pomorum Oregon-R-modENCODE Strain BDGP5, an Acetic Acid Bacterium Found in the Drosophila melanogaster Gut

por Wan, Kenneth H., Yu, Charles, Park, Soo, Hammonds, Ann S., Booth, Benjamin W., Celniker, Susan E.
Publicado 2017

Chromosomal Sequence of Lactobacillus brevis Oregon-R-modENCODE Strain BDGP6, a Lactic Acid Bacterium Isolated from the Gut of Drosophila melanogaster

por Wan, Kenneth H., Yu, Charles, Park, Soo, Hammonds, Ann S., Booth, Benjamin W., Celniker, Susan E.
Publicado 2020

Complete Genome Sequence of the Citrobacter freundii Type Strain

por Wan, Kenneth H., Park, Soo, Hess, Becky M., Neff, Michael J., Booth, Benjamin W., Celniker, Susan E.
Publicado 2020

Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP)

por Hoskins, Roger A., Stapleton, Mark, George, Reed A., Yu, Charles, Wan, Kenneth H., Carlson, Joseph W., Celniker, Susan E.
Publicado 2005

Genome-guided transcript assembly from integrative analysis of RNA sequence data

por Boley, Nathan, Stoiber, Marcus H., Booth, Benjamin W., Wan, Kenneth H., Hoskins, Roger A., Bickel, Peter J., Celniker, Susan E., Brown, James B.
Publicado 2014

Inactivation of multiple human pathogens by Fathhome's dry sanitizer device: Rapid and eco-friendly ozone-based disinfection

por Kenneally, Ryan, Lawrence, Quentin, Brydon, Ella, Wan, Kenneth H., Mao, Jian-Hua, Verma, Subhash C., Khazaieli, Amir, Celniker, Susan E., Snijders, Antoine M.
Publicado 2022

Complete genome sequence of the Microbacterium sp. strain BDGP8

por Wan, Kenneth H., Park, Soo, Booth, Benjamin W., Brydon, Ella C., Eichenberger, Joanne, Inman, Jamie L., Mao, Jian-Hua, Snijders, Antoine M., Celniker, Susan E.
Publicado 2023

Complete Genome Sequence of Agrobacterium sp. Strain 33MFTa1.1, Isolated from Thlaspi arvense Roots

por Langley, Sasha, Eng, Thomas, Wan, Kenneth H., Herbert, Robin A., Klein, Andrew P., Yoshikuni, Yasuo, Tringe, Susannah G., Brown, James B., Celniker, Susan E., Mortimer, Jenny C., Mukhopadhyay, Aindrila
Publicado 2019

Versatile P(acman) BAC Libraries for Transgenesis Studies in Drosophila melanogaster

por Venken, Koen J. T., Carlson, Joseph W., Schulze, Karen L., Pan, Hongling, He, Yuchun, Spokony, Rebecca, Wan, Kenneth H., Koriabine, Maxim, de Jong, Pieter J., White, Kevin P., Bellen, Hugo J., Hoskins, Roger A.
Publicado 2009

Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy

por Arbel, Hamutal, Basu, Sumanta, Fisher, William W., Hammonds, Ann S., Wan, Kenneth H., Park, Soo, Weiszmann, Richard, Booth, Benjamin W., Keranen, Soile V., Henriquez, Clara, Shams Solari, Omid, Bickel, Peter J., Biggin, Mark D., Celniker, Susan E., Brown, James B.
Publicado 2019

An integrated host-microbiome response to atrazine exposure mediates toxicity in Drosophila

por Brown, James B., Langley, Sasha A., Snijders, Antoine M., Wan, Kenneth H., Morris, Siti Nur Sarah, Booth, Benjamin W., Fisher, William W., Hammonds, Ann S., Park, Soo, Weiszmann, Richard, Yu, Charles, Kirwan, Jennifer A., Weber, Ralf J. M., Viant, Mark R., Mao, Jian-Hua, Celniker, Susan E.
Publicado 2021

The Release 6 reference sequence of the Drosophila melanogaster genome

por Hoskins, Roger A., Carlson, Joseph W., Wan, Kenneth H., Park, Soo, Mendez, Ivonne, Galle, Samuel E., Booth, Benjamin W., Pfeiffer, Barret D., George, Reed A., Svirskas, Robert, Krzywinski, Martin, Schein, Jacqueline, Accardo, Maria Carmela, Damia, Elisabetta, Messina, Giovanni, Méndez-Lago, María, de Pablos, Beatriz, Demakova, Olga V., Andreyeva, Evgeniya N., Boldyreva, Lidiya V., Marra, Marco, Carvalho, A. Bernardo, Dimitri, Patrizio, Villasante, Alfredo, Zhimulev, Igor F., Rubin, Gerald M., Karpen, Gary H., Celniker, Susan E.
Publicado 2015

Diversity and dynamics of the Drosophila transcriptome

por Brown, James B., Boley, Nathan, Eisman, Robert, May, Gemma E., Stoiber, Marcus H., Duff, Michael O., Booth, Ben W., Wen, Jiayu, Park, Soo, Suzuki, Ana Maria, Wan, Kenneth H., Yu, Charles, Zhang, Dayu, Carlson, Joseph W., Cherbas, Lucy, Eads, Brian D., Miller, David, Mockaitis, Keithanne, Roberts, Johnny, Davis, Carrie A., Frise, Erwin, Hammonds, Ann S., Olson, Sara, Shenker, Sol, Sturgill, David, Samsonova, Anastasia A., Weiszmann, Richard, Robinson, Garret, Hernandez, Juan, Andrews, Justen, Bickel, Peter J., Carninci, Piero, Cherbas, Peter, Gingeras, Thomas R., Hoskins, Roger A., Kaufman, Thomas C., Lai, Eric C., Oliver, Brian, Perrimon, Norbert, Graveley, Brenton R., Celniker, Susan E.
Publicado 2014

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

por Tang, Hong-Wen, Spirohn, Kerstin, Hu, Yanhui, Hao, Tong, Kovács, István A., Gao, Yue, Binari, Richard, Yang-Zhou, Donghui, Wan, Kenneth H., Bader, Joel S., Balcha, Dawit, Bian, Wenting, Booth, Benjamin W., Coté, Atina G., de Rouck, Steffi, Desbuleux, Alice, Goh, Kah Yong, Kim, Dae-Kyum, Knapp, Jennifer J., Lee, Wen Xing, Lemmens, Irma, Li, Cathleen, Li, Mian, Li, Roujia, Lim, Hyobin Julianne, Liu, Yifang, Luck, Katja, Markey, Dylan, Pollis, Carl, Rangarajan, Sudharshan, Rodiger, Jonathan, Schlabach, Sadie, Shen, Yun, Sheykhkarimli, Dayag, TeeKing, Bridget, Roth, Frederick P., Tavernier, Jan, Calderwood, Michael A., Hill, David E., Celniker, Susan E., Vidal, Marc, Perrimon, Norbert, Mohr, Stephanie E.
Publicado 2023

The Developmental Transcriptome of Drosophila melanogaster

por Graveley, Brenton R., Brooks, Angela N., Carlson, Joseph W., Duff, Michael O., Landolin, Jane M., Yang, Li, Artieri, Carlo G., van Baren, Marijke J., Boley, Nathan, Booth, Benjamin W., Brown, James B., Cherbas, Lucy, Davis, Carrie A., Dobin, Alex, Li, Renhua, Lin, Wei, Malone, John H., Mattiuzzo, Nicolas R., Miller, David, Sturgill, David, Tuch, Brian B., Zaleski, Chris, Zhang, Dayu, Blanchette, Marco, Dudoit, Sandrine, Eads, Brian, Green, Richard E., Hammonds, Ann, Jiang, Lichun, Kapranov, Phil, Langton, Laura, Perrimon, Norbert, Sandler, Jeremy E., Wan, Kenneth H., Willingham, Aarron, Zhang, Yu, Zou, Yi, Andrews, Justen, Bickel, Peter J., Brenner, Steven E., Brent, Michael R., Cherbas, Peter, Gingeras, Thomas R., Hoskins, Roger A., Kaufman, Thomas C., Oliver, Brian, Celniker, Susan E.
Publicado 2010

Comparative Analysis of the Transcriptome across Distant Species

por Gerstein, Mark B., Rozowsky, Joel, Yan, Koon-Kiu, Wang, Daifeng, Cheng, Chao, Brown, James B., Davis, Carrie A, Hillier, LaDeana, Sisu, Cristina, Li, Jingyi Jessica, Pei, Baikang, Harmanci, Arif O., Duff, Michael O., Djebali, Sarah, Alexander, Roger P., Alver, Burak H., Auerbach, Raymond, Bell, Kimberly, Bickel, Peter J., Boeck, Max E., Boley, Nathan P., Booth, Benjamin W., Cherbas, Lucy, Cherbas, Peter, Di, Chao, Dobin, Alex, Drenkow, Jorg, Ewing, Brent, Fang, Gang, Fastuca, Megan, Feingold, Elise A., Frankish, Adam, Gao, Guanjun, Good, Peter J., Guigó, Roderic, Hammonds, Ann, Harrow, Jen, Hoskins, Roger A., Howald, Cédric, Hu, Long, Huang, Haiyan, Hubbard, Tim J. P., Huynh, Chau, Jha, Sonali, Kasper, Dionna, Kato, Masaomi, Kaufman, Thomas C., Kitchen, Robert R., Ladewig, Erik, Lagarde, Julien, Lai, Eric, Leng, Jing, Lu, Zhi, MacCoss, Michael, May, Gemma, McWhirter, Rebecca, Merrihew, Gennifer, Miller, David M., Mortazavi, Ali, Murad, Rabi, Oliver, Brian, Olson, Sara, Park, Peter J., Pazin, Michael J., Perrimon, Norbert, Pervouchine, Dmitri, Reinke, Valerie, Reymond, Alexandre, Robinson, Garrett, Samsonova, Anastasia, Saunders, Gary I., Schlesinger, Felix, Sethi, Anurag, Slack, Frank J., Spencer, William C., Stoiber, Marcus H., Strasbourger, Pnina, Tanzer, Andrea, Thompson, Owen A., Wan, Kenneth H., Wang, Guilin, Wang, Huaien, Watkins, Kathie L., Wen, Jiayu, Wen, Kejia, Xue, Chenghai, Yang, Li, Yip, Kevin, Zaleski, Chris, Zhang, Yan, Zheng, Henry, Brenner, Steven E., Graveley, Brenton R., Celniker, Susan E., Gingeras, Thomas R, Waterston, Robert
Publicado 2014