A generally conserved response to hypoxia in iPSC-derived cardiomyocytes from humans and chimpanzees

por Ward, Michelle C, Gilad, Yoav
Publicado 2019

Dynamic effects of genetic variation on gene expression revealed following hypoxic stress in cardiomyocytes

por Ward, Michelle C, Banovich, Nicholas E, Sarkar, Abhishek, Stephens, Matthew, Gilad, Yoav
Publicado 2021

Silencing of transposable elements may not be a major driver of regulatory evolution in primate iPSCs

por Ward, Michelle C, Zhao, Siming, Luo, Kaixuan, Pavlovic, Bryan J, Karimi, Mohammad M, Stephens, Matthew, Gilad, Yoav
Publicado 2018

Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes

por Schwalie, Petra C, Ward, Michelle C, Cain, Carolyn E, Faure, Andre J, Gilad, Yoav, Odom, Duncan T, Flicek, Paul
Publicado 2013

Successful transmission and transcriptional deployment of a human chromosome via mouse male meiosis

por Ernst, Christina, Pike, Jeremy, Aitken, Sarah J, Long, Hannah K, Eling, Nils, Stojic, Lovorka, Ward, Michelle C, Connor, Frances, Rayner, Timothy F, Lukk, Margus, Klose, Robert J, Kutter, Claudia, Odom, Duncan T
Publicado 2016

Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions

por Findley, Anthony S, Monziani, Alan, Richards, Allison L, Rhodes, Katherine, Ward, Michelle C, Kalita, Cynthia A, Alazizi, Adnan, Pazokitoroudi, Ali, Sankararaman, Sriram, Wen, Xiaoquan, Lanfear, David E, Pique-Regi, Roger, Gilad, Yoav, Luca, Francesca
Publicado 2021

Latent Regulatory Potential of Human-Specific Repetitive Elements

por Ward, Michelle C., Wilson, Michael D., Barbosa-Morais, Nuno L., Schmidt, Dominic, Stark, Rory, Pan, Qun, Schwalie, Petra C., Menon, Suraj, Lukk, Margus, Watt, Stephen, Thybert, David, Kutter, Claudia, Kirschner, Kristina, Flicek, Paul, Blencowe, Benjamin J., Odom, Duncan T.
Publicado 2013

Association of Human iPSC Gene Signatures and X Chromosome Dosage with Two Distinct Cardiac Differentiation Trajectories

por D'Antonio-Chronowska, Agnieszka, Donovan, Margaret K.R., Young Greenwald, William W., Nguyen, Jennifer Phuong, Fujita, Kyohei, Hashem, Sherin, Matsui, Hiroko, Soncin, Francesca, Parast, Mana, Ward, Michelle C., Coulet, Florence, Smith, Erin N., Adler, Eric, D'Antonio, Matteo, Frazer, Kelly A.
Publicado 2019

Impact of regulatory variation across human iPSCs and differentiated cells

por Banovich, Nicholas E., Li, Yang I., Raj, Anil, Ward, Michelle C., Greenside, Peyton, Calderon, Diego, Tung, Po Yuan, Burnett, Jonathan E., Myrthil, Marsha, Thomas, Samantha M., Burrows, Courtney K., Romero, Irene Gallego, Pavlovic, Bryan J., Kundaje, Anshul, Pritchard, Jonathan K., Gilad, Yoav
Publicado 2018

A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics

por Gallego Romero, Irene, Pavlovic, Bryan J, Hernando-Herraez, Irene, Zhou, Xiang, Ward, Michelle C, Banovich, Nicholas E, Kagan, Courtney L, Burnett, Jonathan E, Huang, Constance H, Mitrano, Amy, Chavarria, Claudia I, Friedrich Ben-Nun, Inbar, Li, Yingchun, Sabatini, Karen, Leonardo, Trevor R, Parast, Mana, Marques-Bonet, Tomas, Laurent, Louise C, Loring, Jeanne F, Gilad, Yoav
Publicado 2015

Insights into hominid evolution from the gorilla genome sequence

por Scally, Aylwyn, Dutheil, Julien Y., Hillier, LaDeana W., Jordan, Greg E., Goodhead, Ian, Herrero, Javier, Hobolth, Asger, Lappalainen, Tuuli, Mailund, Thomas, Marques-Bonet, Tomas, McCarthy, Shane, Montgomery, Stephen H., Schwalie, Petra C., Tang, Y. Amy, Ward, Michelle C., Xue, Yali, Yngvadottir, Bryndis, Alkan, Can, Andersen, Lars N., Ayub, Qasim, Ball, Edward V., Beal, Kathryn, Bradley, Brenda J., Chen, Yuan, Clee, Chris M., Fitzgerald, Stephen, Graves, Tina A., Gu, Yong, Heath, Paul, Heger, Andreas, Karakoc, Emre, Kolb-Kokocinski, Anja, Laird, Gavin K., Lunter, Gerton, Meader, Stephen, Mort, Matthew, Mullikin, James C., Munch, Kasper, O’Connor, Timothy D., Phillips, Andrew D., Prado-Martinez, Javier, Rogers, Anthony S., Sajjadian, Saba, Schmidt, Dominic, Shaw, Katy, Simpson, Jared T., Stenson, Peter D., Turner, Daniel J., Vigilant, Linda, Vilella, Albert J., Whitener, Weldon, Zhu, Baoli, Cooper, David N., de Jong, Pieter, Dermitzakis, Emmanouil T., Eichler, Evan E., Flicek, Paul, Goldman, Nick, Mundy, Nicholas I., Ning, Zemin, Odom, Duncan T., Ponting, Chris P., Quail, Michael A., Ryder, Oliver A., Searle, Stephen M., Warren, Wesley C., Wilson, Richard K., Schierup, Mikkel H., Rogers, Jane, Tyler-Smith, Chris, Durbin, Richard
Publicado 2012

Gibbon genome and the fast karyotype evolution of small apes

por Carbone, Lucia, Alan Harris, R., Gnerre, Sante, Veeramah, Krishna R., Lorente-Galdos, Belen, Huddleston, John, Meyer, Thomas J., Herrero, Javier, Roos, Christian, Aken, Bronwen, Anaclerio, Fabio, Archidiacono, Nicoletta, Baker, Carl, Barrell, Daniel, Batzer, Mark A., Beal, Kathryn, Blancher, Antoine, Bohrson, Craig L., Brameier, Markus, Campbell, Michael S., Capozzi, Oronzo, Casola, Claudio, Chiatante, Giorgia, Cree, Andrew, Damert, Annette, de Jong, Pieter J., Dumas, Laura, Fernandez-Callejo, Marcos, Flicek, Paul, Fuchs, Nina V., Gut, Ivo, Gut, Marta, Hahn, Matthew W., Hernandez-Rodriguez, Jessica, Hillier, LaDeana W., Hubley, Robert, Ianc, Bianca, Izsvák, Zsuzsanna, Jablonski, Nina G., Johnstone, Laurel M., Karimpour-Fard, Anis, Konkel, Miriam K., Kostka, Dennis, Lazar, Nathan H., Lee, Sandra L., Lewis, Lora R., Liu, Yue, Locke, Devin P., Mallick, Swapan, Mendez, Fernando L., Muffato, Matthieu, Nazareth, Lynne V., Nevonen, Kimberly A., O’Bleness, Majesta, Ochis, Cornelia, Odom, Duncan T., Pollard, Katherine S., Quilez, Javier, Reich, David, Rocchi, Mariano, Schumann, Gerald G., Searle, Stephen, Sikela, James M., Skollar, Gabriella, Smit, Arian, Sonmez, Kemal, Hallers, Boudewijn ten, Terhune, Elizabeth, Thomas, Gregg W. C., Ullmer, Brygg, Ventura, Mario, Walker, Jerilyn A., Wall, Jeffrey D., Walter, Lutz, Ward, Michelle C., Wheelan, Sarah J., Whelan, Christopher W., White, Simon, Wilhelm, Larry J., Woerner, August E., Yandell, Mark, Zhu, Baoli, Hammer, Michael F., Marques-Bonet, Tomas, Eichler, Evan E., Fulton, Lucinda, Fronick, Catrina, Muzny, Donna M., Warren, Wesley C., Worley, Kim C., Rogers, Jeffrey, Wilson, Richard K., Gibbs, Richard A.
Publicado 2014