struct: an R/Bioconductor-based framework for standardized metabolomics data analysis and beyond

por Lloyd, Gavin Rhys, Jankevics, Andris, Weber, Ralf J M
Publicado 2020

Spatially Mapping the Baseline and Bisphenol-A Exposed Daphnia magna Lipidome Using Desorption Electrospray Ionization—Mass Spectrometry

por Smith, Matthew J., Weber, Ralf J. M., Viant, Mark R.
Publicado 2022

A Stable-Isotope Mass Spectrometry-Based Metabolic Footprinting Approach to Analyze Exudates from Phytoplankton

por Weber, Ralf J. M., Selander, Erik, Sommer, Ulf, Viant, Mark R.
Publicado 2013

Direct infusion mass spectrometry metabolomics dataset: a benchmark for data processing and quality control

por Kirwan, Jennifer A, Weber, Ralf J M, Broadhurst, David I, Viant, Mark R
Publicado 2014

Galaxy-M: a Galaxy workflow for processing and analyzing direct infusion and liquid chromatography mass spectrometry-based metabolomics data

por Davidson, Robert L., Weber, Ralf J. M., Liu, Haoyu, Sharma-Oates, Archana, Viant, Mark R.
Publicado 2016

Acoustic Mist Ionization Mass Spectrometry for Ultrahigh-Throughput Metabolomics Screening

por Smith, Matthew J., Ivanov, Delyan P., Weber, Ralf J. M., Wingfield, Jonathan, Viant, Mark R.
Publicado 2021

Training needs in metabolomics

por Weber, Ralf J. M., Winder, Catherine L., Larcombe, Lee D., Dunn, Warwick B., Viant, Mark R.
Publicado 2015

CASMI—The Small Molecule Identification Process from a Birmingham Perspective

por Allwood, J. William, Weber, Ralf J.M., Zhou, Jiarui, He, Shan, Viant, Mark R., Dunn, Warwick B.
Publicado 2013

Exo-Metabolome of Pseudovibrio sp. FO-BEG1 Analyzed by Ultra-High Resolution Mass Spectrometry and the Effect of Phosphate Limitation

por Romano, Stefano, Dittmar, Thorsten, Bondarev, Vladimir, Weber, Ralf J. M., Viant, Mark R., Schulz-Vogt, Heide N.
Publicado 2014

An Extensive Metabolomics Workflow to Discover Cardiotoxin-Induced Molecular Perturbations in Microtissues

por Bowen, Tara J., Hall, Andrew R., Lloyd, Gavin R., Weber, Ralf J. M., Wilson, Amanda, Pointon, Amy, Viant, Mark R.
Publicado 2021

Integrating in vitro metabolomics with a 96-well high-throughput screening platform

por Malinowska, Julia M., Palosaari, Taina, Sund, Jukka, Carpi, Donatella, Bouhifd, Mounir, Weber, Ralf J. M., Whelan, Maurice, Viant, Mark R.
Publicado 2022

Knowledge-Driven Approaches to Create the MTox700+ Metabolite Panel for Predicting Toxicity

por Sostare, Elena, Lawson, Thomas N, Saunders, Lucy R, Colbourne, John K, Weber, Ralf J M, Sobanski, Tomasz, Viant, Mark R
Publicado 2022

Automated Sample Preparation and Data Collection Workflow for High-Throughput In Vitro Metabolomics

por Malinowska, Julia M., Palosaari, Taina, Sund, Jukka, Carpi, Donatella, Lloyd, Gavin R., Weber, Ralf J. M., Whelan, Maurice, Viant, Mark R.
Publicado 2022

Derivation of metabolic point of departure using high-throughput in vitro metabolomics: investigating the importance of sampling time points on benchmark concentration values in th...

por Malinowska, Julia M., Palosaari, Taina, Sund, Jukka, Carpi, Donatella, Weber, Ralf J. M., Lloyd, Gavin R., Whelan, Maurice, Viant, Mark R.
Publicado 2023

Non-targeted UHPLC-MS metabolomic data processing methods: a comparative investigation of normalisation, missing value imputation, transformation and scaling

por Di Guida, Riccardo, Engel, Jasper, Allwood, J. William, Weber, Ralf J. M., Jones, Martin R., Sommer, Ulf, Viant, Mark R., Dunn, Warwick B.
Publicado 2016

mzML2ISA & nmrML2ISA: generating enriched ISA-Tab metadata files from metabolomics XML data

por Larralde, Martin, Lawson, Thomas N, Weber, Ralf J M, Moreno, Pablo, Haug, Kenneth, Rocca-Serra, Philippe, Viant, Mark R, Steinbeck, Christoph, Salek, Reza M
Publicado 2017

Simultaneously discovering the fate and biochemical effects of pharmaceuticals through untargeted metabolomics

por Bowen, Tara J., Southam, Andrew D., Hall, Andrew R., Weber, Ralf J. M., Lloyd, Gavin R., Macdonald, Ruth, Wilson, Amanda, Pointon, Amy, Viant, Mark R.
Publicado 2023

HAMMER: automated operation of mass frontier to construct in silico mass spectral fragmentation libraries

por Zhou, Jiarui, Weber, Ralf J. M., Allwood, J. William, Mistrik, Robert, Zhu, Zexuan, Ji, Zhen, Chen, Siping, Dunn, Warwick B., He, Shan, Viant, Mark R.
Publicado 2014

Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources

por Allaway, David, Alexander, Janet E., Carvell-Miller, Laura J., Reynolds, Rhiannon M., Winder, Catherine L., Weber, Ralf J. M., Lloyd, Gavin R., Southam, Andrew D., Dunn, Warwick B.
Publicado 2022

Metabolic characterisation of disturbances in the APOC3/triglyceride-rich lipoprotein pathway through sample-based recall by genotype

por Corbin, Laura J., Hughes, David A., Chetwynd, Andrew J., Taylor, Amy E., Southam, Andrew D., Jankevics, Andris, Weber, Ralf J. M., Groom, Alix, Dunn, Warwick B., Timpson, Nicholas J.
Publicado 2020