Introduction to the Special Issue “Bioinformatic tools and approaches for Synthetic Biology of natural products”

por Weber, Tilmann
Publicado 2016

The secondary metabolite bioinformatics portal: Computational tools to facilitate synthetic biology of secondary metabolite production

por Weber, Tilmann, Kim, Hyun Uk
Publicado 2016

Patscanui: an intuitive web interface for searching patterns in DNA and protein data

por Blin, Kai, Wohlleben, Wolfgang, Weber, Tilmann
Publicado 2018

Improved Lanthipeptide Detection and Prediction for antiSMASH

por Blin, Kai, Kazempour, Daniyal, Wohlleben, Wolfgang, Weber, Tilmann
Publicado 2014

Designing sgRNAs for CRISPR-BEST base editing applications with CRISPy-web 2.0

por Blin, Kai, Shaw, Simon, Tong, Yaojun, Weber, Tilmann
Publicado 2020

Phylogenetic Distribution of Secondary Metabolites in the Bacillus subtilis Species Complex

por Steinke, Kat, Mohite, Omkar S., Weber, Tilmann, Kovács, Ákos T.
Publicado 2021

High-Quality Sequencing, Assembly, and Annotation of the Streptomyces griseofuscus DSM 40191 Genome

por Gren, Tetiana, Jørgensen, Tue S., Whitford, Christopher M., Weber, Tilmann
Publicado 2020

CRISPy-web: An online resource to design sgRNAs for CRISPR applications

por Blin, Kai, Pedersen, Lasse Ebdrup, Weber, Tilmann, Lee, Sang Yup
Publicado 2016

Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters

por Blin, Kai, Kim, Hyun Uk, Medema, Marnix H, Weber, Tilmann
Publicado 2017

Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs)

por Rausch, Christian, Weber, Tilmann, Kohlbacher, Oliver, Wohlleben, Wolfgang, Huson, Daniel H.
Publicado 2005

Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution

por Rausch, Christian, Hoof, Ilka, Weber, Tilmann, Wohlleben, Wolfgang, Huson, Daniel H
Publicado 2007

The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters

por Blin, Kai, Medema, Marnix H., Kottmann, Renzo, Lee, Sang Yup, Weber, Tilmann
Publicado 2017

BiG-FAM: the biosynthetic gene cluster families database

por Kautsar, Satria A, Blin, Kai, Shaw, Simon, Weber, Tilmann, Medema, Marnix H
Publicado 2020

The antiSMASH database version 3: increased taxonomic coverage and new query features for modular enzymes

por Blin, Kai, Shaw, Simon, Kautsar, Satria A, Medema, Marnix H, Weber, Tilmann
Publicado 2020

A versatile genetic engineering toolkit for E. coli based on CRISPR-prime editing

por Tong, Yaojun, Jørgensen, Tue S., Whitford, Christopher M., Weber, Tilmann, Lee, Sang Yup
Publicado 2021

NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity

por Röttig, Marc, Medema, Marnix H., Blin, Kai, Weber, Tilmann, Rausch, Christian, Kohlbacher, Oliver
Publicado 2011

Pangenome analysis of Enterobacteria reveals richness of secondary metabolite gene clusters and their associated gene sets

por Mohite, Omkar S., Lloyd, Colton J., Monk, Jonathan M., Weber, Tilmann, Palsson, Bernhard O.
Publicado 2022

ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining

por Mungan, Mehmet Direnç, Alanjary, Mohammad, Blin, Kai, Weber, Tilmann, Medema, Marnix H, Ziemert, Nadine
Publicado 2020

Characterization of the ‘pristinamycin supercluster’ of Streptomyces pristinaespiralis

por Mast, Yvonne, Weber, Tilmann, Gölz, Melanie, Ort‐Winklbauer, Regina, Gondran, Anne, Wohlleben, Wolfgang, Schinko, Eva
Publicado 2011

Complete Genome Sequence of the Collinolactone Producer Streptomyces sp. Strain Gö40/10

por Sterndorff, Eva B., Jørgensen, Tue S., Garzón, Jaime Felipe Guerrero, Schmid, Julian, Grond, Stephanie, Weber, Tilmann
Publicado 2022