Generation, functional annotation and comparative analysis of black spruce (Picea mariana) ESTs: an important conifer genomic resource

por Mann, Ishminder K, Wegrzyn, Jill L, Rajora, Om P
Publicado 2013

Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites

por Wegrzyn, Jill L, Drudge, Thomas M, Valafar, Faramarz, Hook, Vivian
Publicado 2008

PineSAP—sequence alignment and SNP identification pipeline

por Wegrzyn, Jill L., Lee, Jennifer M., Liechty, John, Neale, David B.
Publicado 2009

Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

por Visser, Erik A., Wegrzyn, Jill L., Myburg, Alexander A., Naidoo, Sanushka
Publicado 2018

TreeGenes: A Forest Tree Genome Database

por Wegrzyn, Jill L., Lee, Jennifer M., Tearse, Brandon R., Neale, David B.
Publicado 2008

Open access to tree genomes: the path to a better forest

por Neale, David B, Langley, Charles H, Salzberg, Steven L, Wegrzyn, Jill L
Publicado 2013

Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot transcriptome

por Visser, Erik A., Wegrzyn, Jill L., Steenkmap, Emma T., Myburg, Alexander A., Naidoo, Sanushka
Publicado 2015

Dual RNA-Seq Analysis of the Pine-Fusarium circinatum Interaction in Resistant (Pinus tecunumanii) and Susceptible (Pinus patula) Hosts

por Visser, Erik A., Wegrzyn, Jill L., Steenkamp, Emma T., Myburg, Alexander A., Naidoo, Sanushka
Publicado 2019

Cyberinfrastructure and resources to enable an integrative approach to studying forest trees

por Wegrzyn, Jill L., Falk, Taylor, Grau, Emily, Buehler, Sean, Ramnath, Risharde, Herndon, Nic
Publicado 2019

Haplogenome assembly reveals structural variation in Eucalyptus interspecific hybrids

por Lötter, Anneri, Duong, Tuan A, Candotti, Julia, Mizrachi, Eshchar, Wegrzyn, Jill L, Myburg, Alexander A
Publicado 2023

A long-read and short-read transcriptomics approach provides the first high-quality reference transcriptome and genome annotation for Pseudotsuga menziesii (Douglas-fir)

por Velasco, Vera Marjorie Elauria, Ferreira, Alyssa, Zaman, Sumaira, Noordermeer, Devin, Ensminger, Ingo, Wegrzyn, Jill L
Publicado 2022

Contrasting patterns of nucleotide diversity for four conifers of Alpine European forests

por Mosca, Elena, Eckert, Andrew J, Liechty, John D, Wegrzyn, Jill L, La Porta, Nicola, Vendramin, Giovanni G, Neale, David B
Publicado 2012

Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles

por Cronn, Richard, Dolan, Peter C., Jogdeo, Sanjuro, Wegrzyn, Jill L., Neale, David B., St. Clair, J. Bradley, Denver, Dee R.
Publicado 2017

Extensive Variation in Drought-Induced Gene Expression Changes Between Loblolly Pine Genotypes

por Li, Jingjia, West, Jason B., Hart, Alexander, Wegrzyn, Jill L., Smith, Matthew A., Domec, Jean-Christophe, Loopstra, Carol A., Casola, Claudio
Publicado 2021

Green plant genomes: What we know in an era of rapidly expanding opportunities

por Kress, W. John, Soltis, Douglas E., Kersey, Paul J., Wegrzyn, Jill L., Leebens-Mack, James H., Gostel, Morgan R., Liu, Xin, Soltis, Pamela S.
Publicado 2022

De novo assembly of a fruit transcriptome set identifies AmMYB10 as a key regulator of anthocyanin biosynthesis in Aronia melanocarpa

por Mahoney, Jonathan D., Wang, Sining, Iorio, Liam A., Wegrzyn, Jill L., Dorris, Matthew, Martin, Derek, Bolling, Bradley W., Brand, Mark H., Wang, Huanzhong
Publicado 2022

Comparative analysis of differential gene expression indicates divergence in ontogenetic strategies of leaves in two conifer genera

por Webster, Cynthia, Figueroa‐Corona, Laura, Méndez‐González, Iván David, Álvarez‐Soto, Lluvia, Neale, David B., Jaramillo‐Correa, Juan Pablo, Wegrzyn, Jill L., Vázquez‐Lobo, Alejandra
Publicado 2022

Strategies of tolerance reflected in two North American maple genomes

por McEvoy, Susan L., Sezen, U. Uzay, Trouern‐Trend, Alexander, McMahon, Sean M., Schaberg, Paul G., Yang, Jie, Wegrzyn, Jill L., Swenson, Nathan G.
Publicado 2022

Welcome to the big leaves: Best practices for improving genome annotation in non‐model plant genomes

por Vuruputoor, Vidya S., Monyak, Daniel, Fetter, Karl C., Webster, Cynthia, Bhattarai, Akriti, Shrestha, Bikash, Zaman, Sumaira, Bennett, Jeremy, McEvoy, Susan L., Caballero, Madison, Wegrzyn, Jill L.
Publicado 2023

An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

por Zimin, Aleksey V., Stevens, Kristian A., Crepeau, Marc W., Puiu, Daniela, Wegrzyn, Jill L., Yorke, James A., Langley, Charles H., Neale, David B., Salzberg, Steven L.
Publicado 2017