Hydroxymethyluracil modifications enhance the flexibility and hydrophilicity of double-stranded DNA

por Carson, Spencer, Wilson, James, Aksimentiev, Aleksei, Weigele, Peter R., Wanunu, Meni
Publicado 2016

Characterization of Cme and Yme thermostable Cas12a orthologs

por Fuchs, Ryan T., Curcuru, Jennifer L., Mabuchi, Megumu, Noireterre, Audrey, Weigele, Peter R., Sun, Zhiyi, Robb, G. Brett
Publicado 2022

Identification and biosynthesis of thymidine hypermodifications in the genomic DNA of widespread bacterial viruses

por Lee, Yan-Jiun, Dai, Nan, Walsh, Shannon E., Müller, Stephanie, Fraser, Morgan E., Kauffman, Kathryn M., Guan, Chudi, Corrêa, Ivan R., Weigele, Peter R.
Publicado 2018

Genome analysis of Salmonella enterica serovar Typhimurium bacteriophage L, indicator for StySA (StyLT2III) restriction-modification system action

por Zaworski, Julie, McClung, Colleen, Ruse, Cristian, Weigele, Peter R, Hendrix, Roger W, Ko, Ching-Chung, Edgar, Robert, Hatfull, Graham F, Casjens, Sherwood R, Raleigh, Elisabeth A
Publicado 2020

Phage-encoded ten-eleven translocation dioxygenase (TET) is active in C5-cytosine hypermodification in DNA

por Burke, Evan J., Rodda, Samuel S., Lund, Sean R., Sun, Zhiyi, Zeroka, Malcolm R., O’Toole, Katherine H., Parker, Mackenzie J., Doshi, Dharit S., Guan, Chudi, Lee, Yan-Jiun, Dai, Nan, Hough, David M., Shnider, Daria A., Corrêa, Ivan R., Weigele, Peter R., Saleh, Lana
Publicado 2021

Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments

por Sullivan, Matthew B, Huang, Katherine H, Ignacio-Espinoza, Julio C, Berlin, Aaron M, Kelly, Libusha, Weigele, Peter R, DeFrancesco, Alicia S, Kern, Suzanne E, Thompson, Luke R, Young, Sarah, Yandava, Chandri, Fu, Ross, Krastins, Bryan, Chase, Michael, Sarracino, David, Osburne, Marcia S, Henn, Matthew R, Chisholm, Sallie W
Publicado 2010

Pathways of thymidine hypermodification

por Lee, Yan-Jiun, Dai, Nan, Müller, Stephanie I, Guan, Chudi, Parker, Mackenzie J, Fraser, Morgan E, Walsh, Shannon E, Sridar, Janani, Mulholland, Andrew, Nayak, Krutika, Sun, Zhiyi, Lin, Yu-Cheng, Comb, Donald G, Marks, Katherine, Gonzalez, Reyaz, Dowling, Daniel P, Bandarian, Vahe, Saleh, Lana, Corrêa, Ivan R, Weigele, Peter R
Publicado 2021

Four additional natural 7-deazaguanine derivatives in phages and how to make them

por Cui, Liang, Balamkundu, Seetharamsing, Liu, Chuan-Fa, Ye, Hong, Hourihan, Jacob, Rausch, Astrid, Hauß, Christopher, Nilsson, Emelie, Hoetzinger, Matthias, Holmfeldt, Karin, Zhang, Weijia, Martinez-Alvarez, Laura, Peng, Xu, Tremblay, Denise, Moineau, Sylvain, Solonenko, Natalie, Sullivan, Matthew B, Lee, Yan-Jiun, Mulholland, Andrew, Weigele, Peter R, de Crécy-Lagard, Valérie, Dedon, Peter C, Hutinet, Geoffrey
Publicado 2023

A catalogue of biochemically diverse CRISPR-Cas9 orthologs

por Gasiunas, Giedrius, Young, Joshua K., Karvelis, Tautvydas, Kazlauskas, Darius, Urbaitis, Tomas, Jasnauskaite, Monika, Grusyte, Mantvyda M., Paulraj, Sushmitha, Wang, Po-Hao, Hou, Zhenglin, Dooley, Shane K., Cigan, Mark, Alarcon, Clara, Chilcoat, N. Doane, Bigelyte, Greta, Curcuru, Jennifer L., Mabuchi, Megumu, Sun, Zhiyi, Fuchs, Ryan T., Schildkraut, Ezra, Weigele, Peter R., Jack, William E., Robb, G. Brett, Venclovas, Česlovas, Siksnys, Virginijus
Publicado 2020

A roadmap for the functional annotation of protein families: a community perspective

por de Crécy-lagard, Valérie, Amorin de Hegedus, Rocio, Arighi, Cecilia, Babor, Jill, Bateman, Alex, Blaby, Ian, Blaby-Haas, Crysten, Bridge, Alan J, Burley, Stephen K, Cleveland, Stacey, Colwell, Lucy J, Conesa, Ana, Dallago, Christian, Danchin, Antoine, de Waard, Anita, Deutschbauer, Adam, Dias, Raquel, Ding, Yousong, Fang, Gang, Friedberg, Iddo, Gerlt, John, Goldford, Joshua, Gorelik, Mark, Gyori, Benjamin M, Henry, Christopher, Hutinet, Geoffrey, Jaroch, Marshall, Karp, Peter D, Kondratova, Liudmyla, Lu, Zhiyong, Marchler-Bauer, Aron, Martin, Maria-Jesus, McWhite, Claire, Moghe, Gaurav D, Monaghan, Paul, Morgat, Anne, Mungall, Christopher J, Natale, Darren A, Nelson, William C, O’Donoghue, Seán, Orengo, Christine, O’Toole, Katherine H, Radivojac, Predrag, Reed, Colbie, Roberts, Richard J, Rodionov, Dmitri, Rodionova, Irina A, Rudolf, Jeffrey D, Saleh, Lana, Sheynkman, Gloria, Thibaud-Nissen, Francoise, Thomas, Paul D, Uetz, Peter, Vallenet, David, Carter, Erica Watson, Weigele, Peter R, Wood, Valerie, Wood-Charlson, Elisha M, Xu, Jin
Publicado 2022