Non-coding yet non-trivial: a review on the computational genomics of lincRNAs

por Ching, Travers, Masaki, Jayson, Weirather, Jason, Garmire, Lana X.
Publicado 2015

IDP-ASE: haplotyping and quantifying allele-specific expression at the gene and gene isoform level by hybrid sequencing

por Deonovic, Benjamin, Wang, Yunhao, Weirather, Jason, Wang, Xiu-Jie, Au, Kin Fai
Publicado 2017

Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis

por Weirather, Jason L, de Cesare, Mariateresa, Wang, Yunhao, Piazza, Paolo, Sebastiano, Vittorio, Wang, Xiu-Jie, Buck, David, Au, Kin Fai
Publicado 2017

Single cell expression analysis of primate-specific retroviruses-derived HPAT lincRNAs in viable human blastocysts identifies embryonic cells co-expressing genetic markers of multi...

por Glinsky, Gennadi, Durruthy-Durruthy, Jens, Wossidlo, Mark, Grow, Edward J., Weirather, Jason L., Au, Kin Fai, Wysocka, Joanna, Sebastiano, Vittorio
Publicado 2018

Diffuse large B-cell lymphomas have spatially defined, tumor immune microenvironments revealed by high-parameter imaging

por Wright, Kyle T., Weirather, Jason L., Jiang, Sizun, Kao, Katrina Z., Sigal, Yari, Giobbie-Hurder, Anita, Shipp, Margaret A., Rodig, Scott J.
Publicado 2023

Characterization of fusion genes and the significantly expressed fusion isoforms in breast cancer by hybrid sequencing

por Weirather, Jason L., Afshar, Pegah Tootoonchi, Clark, Tyson A., Tseng, Elizabeth, Powers, Linda S., Underwood, Jason G., Zabner, Joseph, Korlach, Jonas, Wong, Wing Hung, Au, Kin Fai
Publicado 2015

EDIL3 as an Angiogenic Target of Immune Exclusion Following Checkpoint Blockade

por Tabasum, Saba, Thapa, Dinesh, Giobbie-Hurder, Anita, Weirather, Jason L., Campisi, Marco, Schol, Pieter J., Li, Xiaoyu, Li, Jingjing, Yoon, Charles H., Manos, Michael P., Barbie, David A., Hodi, F. Stephen
Publicado 2023

Characterization of genetics in patients with mucosal melanoma treated with immune checkpoint blockade

por Buchbinder, Elizabeth I., Weirather, Jason L., Manos, Michael, Quattrochi, Brian J., Sholl, Lynette M., Brennick, Ryan C., Bowling, Peter, Bailey, Nancy, Magarace, Lisa, Ott, Patrick A., Haq, Rizwan, Izar, Benjamin, Giobbie‐Hurder, Anita, Hodi, F. Stephen
Publicado 2021

Interferon Regulatory Factor 6 promotes differentiation of the periderm by activating expression of Grainyhead-like 3

por de la Garza, Gabriel, Schleiffarth, Jack Robert, Dunnwald, Martine, Mankad, Anuj, Weirather, Jason L., Bonde, Gregory, Butcher, Stephen, Mansour, Tamer A., Kousa, Youssef A., Fukazawa, Cindy F., Houston, Douglas W., Manak, J. Robert, Schutte, Brian C., Wagner, Daniel, Cornell, Robert A.
Publicado 2012

Integrated molecular drivers coordinate biological and clinical states in melanoma

por Conway, Jake R., Dietlein, Felix, Taylor-Weiner, Amaro, AlDubayan, Saud, Vokes, Natalie, Keenan, Tanya, Reardon, Brendan, He, Meng Xiao, Margolis, Claire A., Weirather, Jason L., Haq, Rizwan, Schilling, Bastian, Hodi, F. Stephen, Schadendorf, Dirk, Liu, David, Van Allen, Eliezer M.
Publicado 2020

A randomized phase 2 study of neoadjuvant carboplatin and paclitaxel with or without atezolizumab in triple negative breast cancer (TNBC) - NCI 10013

por Ademuyiwa, Foluso O., Gao, Feng, Street, Cherease R., Chen, Ina, Northfelt, Donald W., Wesolowski, Robert, Arora, Mili, Brufsky, Adam, Dees, E. Claire, Santa-Maria, Cesar A., Connolly, Roisin M., Force, Jeremy, Moreno-Aspitia, Alvaro, Herndon, John M., Carmody, Madelyn, Davies, Sherri R., Larson, Sarah, Pfaff, Kathleen L., Jones, Stephanie M., Weirather, Jason L., Giobbie-Hurder, Anita, Rodig, Scott J., Liu, Zheng, Hagemann, Ian S., Sharon, Elad, Gillanders, William E.
Publicado 2022

Combined protein and nucleic acid imaging reveals virus-dependent B cell and macrophage immunosuppression of tissue microenvironments

por Jiang, Sizun, Chan, Chi Ngai, Rovira-Clavé, Xavier, Chen, Han, Bai, Yunhao, Zhu, Bokai, McCaffrey, Erin, Greenwald, Noah F., Liu, Candace, Barlow, Graham L., Weirather, Jason L., Oliveria, John Paul, Nakayama, Tsuguhisa, Lee, Ivan T., Matter, Matthias S., Carlisle, Anne E., Philips, Darci, Vazquez, Gustavo, Mukherjee, Nilanjan, Busman-Sahay, Kathleen, Nekorchuk, Michael, Terry, Margaret, Younger, Skyler, Bosse, Marc, Demeter, Janos, Rodig, Scott J., Tzankov, Alexandar, Goltsev, Yury, McIlwain, David Robert, Angelo, Michael, Estes, Jacob D., Nolan, Garry P.
Publicado 2022