Salivary bacterial signatures in depression-obesity comorbidity are associated with neurotransmitters and neuroactive dipeptides

por Aleti, Gajender, Kohn, Jordan N., Troyer, Emily A., Weldon, Kelly, Huang, Shi, Tripathi, Anupriya, Dorrestein, Pieter C., Swafford, Austin D., Knight, Rob, Hong, Suzi
Publicado 2022

Class Ib MHC–Mediated Immune Interactions Play a Critical Role in Maintaining Mucosal Homeostasis in the Mammalian Large Intestine

por Dasgupta, Suryasarathi, Maricic, Igor, Tang, Jay, Wandro, Stephen, Weldon, Kelly, Carpenter, Carolina S., Eckmann, Lars, Rivera-Nieves, Jesus, Sandborn, William, Knight, Rob, Dorrestein, Peter, Swafford, Austin D., Kumar, Vipin
Publicado 2021

Non-invasive skin sampling detects systemically administered drugs in humans

por Panitchpakdi, Morgan, Weldon, Kelly C., Jarmusch, Alan K., Gentry, Emily C., Choi, Arianna, Sepulveda, Yadira, Aguirre, Shaden, Sun, Kunyang, Momper, Jeremiah D., Dorrestein, Pieter C., Tsunoda, Shirley M.
Publicado 2022

Metabolome-Informed Microbiome Analysis Refines Metadata Classifications and Reveals Unexpected Medication Transfer in Captive Cheetahs

por Gauglitz, Julia M., Morton, James T., Tripathi, Anupriya, Hansen, Shalisa, Gaffney, Michele, Carpenter, Carolina, Weldon, Kelly C., Shah, Riya, Parampil, Amy, Fidgett, Andrea L., Swafford, Austin D., Knight, Rob, Dorrestein, Pieter C.
Publicado 2020

The impact of maternal asthma on the preterm infants' gut metabolome and microbiome (MAP study)

por Bai-Tong, Shiyu S., Thoemmes, Megan S., Weldon, Kelly C., Motazavi, Diba, Kitsen, Jessica, Hansen, Shalisa, Furst, Annalee, Geng, Bob, Song, Se Jin, Gilbert, Jack A., Bode, Lars, Dorrestein, Pieter C., Knight, Rob, Leibel, Sydney A., Leibel, Sandra L.
Publicado 2022

Signatures of HIV and Major Depressive Disorder in the Plasma Microbiome

por Taylor, Bryn C., Sheikh Andalibi, Mohammadsobhan, Wandro, Stephen, Weldon, Kelly C., Sepich-Poore, Gregory D., Carpenter, Carolina S., Fraraccio, Serena, Franklin, Donald, Iudicello, Jennifer E., Letendre, Scott, Gianella, Sara, Grant, Igor, Ellis, Ronald J., Heaton, Robert K., Knight, Rob, Swafford, Austin D.
Publicado 2023

Reduced Independence in Daily Living Is Associated with the Gut Microbiome in People with HIV and HCV

por Taylor, Bryn C., Weldon, Kelly C., Ellis, Ronald J., Franklin, Donald, McDonald, Daniel, Humphrey, Gregory, Bryant, MacKenzie, Toronczak, Julia, Schwartz, Tara, Iudicello, Jennifer, Heaton, Robert, Grant, Igor, Gianella, Sara, Letendre, Scott, Swafford, Austin, Dorrestein, Pieter C., Knight, Rob
Publicado 2020

Depression in Individuals Coinfected with HIV and HCV Is Associated with Systematic Differences in the Gut Microbiome and Metabolome

por Taylor, Bryn C., Weldon, Kelly C., Ellis, Ronald J., Franklin, Donald, Groth, Tobin, Gentry, Emily C., Tripathi, Anupriya, McDonald, Daniel, Humphrey, Gregory, Bryant, MacKenzie, Toronczak, Julia, Schwartz, Tara, Oliveira, Michelli F., Heaton, Robert, Grant, Igor, Gianella, Sara, Letendre, Scott, Swafford, Austin, Dorrestein, Pieter C., Knight, Rob
Publicado 2020

Multi-omics analyses of the Ulcerative Colitis gut microbiome link Bacteroides vulgatus proteases with disease severity

por Mills, Robert H., Dulai, Parambir S., Vázquez-Baeza, Yoshiki, Sauceda, Consuelo, Daniel, Noëmie, Gerner, Romana R., Batachari, Lakshmi E., Ochoa, Mario Malfavon, Zhu, Qiyun, Weldon, Kelly, Humphrey, Greg, Carrillo-Terrazas, Marvic, Goldasich, Lindsay DeRight, Bryant, MacKenzie, Raffatellu, Manuela, Quinn, Robert A., Gewirtz, Andrew T., Chassaing, Benoit, Chu, Hiutung, Sandborn, William J., Dorrestein, Pieter C., Knight, Rob, Gonzalez, David J.
Publicado 2022

Gastrointestinal Surgery for Inflammatory Bowel Disease Persistently Lowers Microbiome and Metabolome Diversity

por Fang, Xin, Vázquez-Baeza, Yoshiki, Elijah, Emmanuel, Vargas, Fernando, Ackermann, Gail, Humphrey, Gregory, Lau, Rebecca, Weldon, Kelly C, Sanders, Jon G, Panitchpakdi, Morgan, Carpenter, Carolina, Jarmusch, Alan K, Neill, Jennifer, Miralles, Ara, Dulai, Parambir, Singh, Siddharth, Tsai, Matthew, Swafford, Austin D, Smarr, Larry, Boyle, David L, Palsson, Bernhard O, Chang, John T, Dorrestein, Pieter C, Sandborn, William J, Knight, Rob, Boland, Brigid S
Publicado 2020

Plasma metabolites with mechanistic and clinical links to the neurovascular disease cavernous angioma

por Srinath, Abhinav, Xie, Bingqing, Li, Ying, Sone, Je Yeong, Romanos, Sharbel, Chen, Chang, Sharma, Anukriti, Polster, Sean, Dorrestein, Pieter C., Weldon, Kelly C., DeBiasse, Dorothy, Moore, Thomas, Lightle, Rhonda, Koskimäki, Janne, Zhang, Dongdong, Stadnik, Agnieszka, Piedad, Kristina, Hagan, Matthew, Shkoukani, Abdallah, Carrión-Penagos, Julián, Bi, Dehua, Shen, Le, Shenkar, Robert, Ji, Yuan, Sidebottom, Ashley, Pamer, Eric, Gilbert, Jack A., Kahn, Mark L., D’Souza, Mark, Sulakhe, Dinanath, Awad, Issam A., Girard, Romuald
Publicado 2023

The Host-Microbiome Response to Hyperbaric Oxygen Therapy in Ulcerative Colitis Patients

por Gonzalez, Carlos G., Mills, Robert H., Kordahi, Melissa C., Carrillo-Terrazas, Marvic, Secaira-Morocho, Henry, Widjaja, Christella E., Tsai, Matthew S., Mittal, Yash, Yee, Brian A., Vargas, Fernando, Weldon, Kelly, Gauglitz, Julia M., Delaroque, Clara, Sauceda, Consuelo, Rossitto, Leigh-Ana, Ackermann, Gail, Humphrey, Gregory, Swafford, Austin D., Siegel, Corey A., Buckey, Jay C., Raffals, Laura E., Sadler, Charlotte, Lindholm, Peter, Fisch, Kathleen M., Valaseck, Mark, Suriawinata, Arief, Yeo, Gene W., Ghosh, Pradipta, Chang, John T., Chu, Hiutung, Dorrestein, Pieter, Zhu, Qiyun, Chassaing, Benoit, Knight, Rob, Gonzalez, David J., Dulai, Parambir S.
Publicado 2022

Effects of Immunization With the Soil-Derived Bacterium Mycobacterium vaccae on Stress Coping Behaviors and Cognitive Performance in a “Two Hit” Stressor Model

por Foxx, Christine L., Heinze, Jared D., González, Antonio, Vargas, Fernando, Baratta, Michael V., Elsayed, Ahmed I., Stewart, Jessica R., Loupy, Kelsey M., Arnold, Mathew R., Flux, M. C., Sago, Saydie A., Siebler, Philip H., Milton, Lauren N., Lieb, Margaret W., Hassell, James E., Smith, David G., Lee, Kyo A. K., Appiah, Sandra A., Schaefer, Evan J., Panitchpakdi, Morgan, Sikora, Nicole C., Weldon, Kelly C., Stamper, Christopher E., Schmidt, Dominic, Duggan, David A., Mengesha, Yosan M., Ogbaselassie, Mikale, Nguyen, Kadi T., Gates, Chloe A., Schnabel, K’loni, Tran, Linh, Jones, Joslynn D., Vitaterna, Martha H., Turek, Fred W., Fleshner, Monika, Dorrestein, Pieter C., Knight, Rob, Wright, Kenneth P., Lowry, Christopher A.
Publicado 2021

Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment

por Schmid, Robin, Petras, Daniel, Nothias, Louis-Félix, Wang, Mingxun, Aron, Allegra T., Jagels, Annika, Tsugawa, Hiroshi, Rainer, Johannes, Garcia-Aloy, Mar, Dührkop, Kai, Korf, Ansgar, Pluskal, Tomáš, Kameník, Zdeněk, Jarmusch, Alan K., Caraballo-Rodríguez, Andrés Mauricio, Weldon, Kelly C., Nothias-Esposito, Melissa, Aksenov, Alexander A., Bauermeister, Anelize, Albarracin Orio, Andrea, Grundmann, Carlismari O., Vargas, Fernando, Koester, Irina, Gauglitz, Julia M., Gentry, Emily C., Hövelmann, Yannick, Kalinina, Svetlana A., Pendergraft, Matthew A., Panitchpakdi, Morgan, Tehan, Richard, Le Gouellec, Audrey, Aleti, Gajender, Mannochio Russo, Helena, Arndt, Birgit, Hübner, Florian, Hayen, Heiko, Zhi, Hui, Raffatellu, Manuela, Prather, Kimberly A., Aluwihare, Lihini I., Böcker, Sebastian, McPhail, Kerry L., Humpf, Hans-Ulrich, Karst, Uwe, Dorrestein, Pieter C.
Publicado 2021

Feature-Based Molecular Networking in the GNPS Analysis Environment

por Nothias, Louis Felix, Petras, Daniel, Schmid, Robin, Dührkop, Kai, Rainer, Johannes, Sarvepalli, Abinesh, Protsyuk, Ivan, Ernst, Madeleine, Tsugawa, Hiroshi, Fleischauer, Markus, Aicheler, Fabian, Aksenov, Alexander, Alka, Oliver, Allard, Pierre-Marie, Barsch, Aiko, Cachet, Xavier, Caraballo, Mauricio, Silva, Ricardo R. Da, Dang, Tam, Garg, Neha, Gauglitz, Julia M., Gurevich, Alexey, Isaac, Giorgis, Jarmusch, Alan K., Kameník, Zdeněk, Kang, Kyo Bin, Kessler, Nikolas, Koester, Irina, Korf, Ansgar, Gouellec, Audrey Le, Ludwig, Marcus, H., Christian Martin, McCall, Laura-Isobel, McSayles, Jonathan, Meyer, Sven W., Mohimani, Hosein, Morsy, Mustafa, Moyne, Oriane, Neumann, Steffen, Neuweger, Heiko, Nguyen, Ngoc Hung, Nothias-Esposito, Melissa, Paolini, Julien, Phelan, Vanessa V., Pluskal, Tomáš, Quinn, Robert A., Rogers, Simon, Shrestha, Bindesh, Tripathi, Anupriya, van der Hooft, Justin J.J., Vargas, Fernando, Weldon, Kelly C., Witting, Michael, Yang, Heejung, Zhang, Zheng, Zubeil, Florian, Kohlbacher, Oliver, Böcker, Sebastian, Alexandrov, Theodore, Bandeira, Nuno, Wang, Mingxun, Dorrestein, Pieter C.
Publicado 2020

A community resource for paired genomic and metabolomic data mining

por Schorn, Michelle A., Verhoeven, Stefan, Ridder, Lars, Huber, Florian, Acharya, Deepa D., Aksenov, Alexander A., Aleti, Gajender, Moghaddam, Jamshid Amiri, Aron, Allegra T., Aziz, Saefuddin, Bauermeister, Anelize, Bauman, Katherine D., Baunach, Martin, Beemelmanns, Christine, Beman, J. Michael, Berlanga-Clavero, María Victoria, Blacutt, Alex A., Bode, Helge B., Boullie, Anne, Brejnrod, Asker, Bugni, Tim S., Calteau, Alexandra, Cao, Liu, Carrión, Víctor J., Castelo-Branco, Raquel, Chanana, Shaurya, Chase, Alexander B., Chevrette, Marc G., Costa-Lotufo, Leticia V., Crawford, Jason M., Currie, Cameron R., Cuypers, Bart, Dang, Tam, de Rond, Tristan, Demko, Alyssa M., Dittmann, Elke, Du, Chao, Drozd, Christopher, Dujardin, Jean-Claude, Dutton, Rachel J., Edlund, Anna, Fewer, David P., Garg, Neha, Gauglitz, Julia M., Gentry, Emily C., Gerwick, Lena, Glukhov, Evgenia, Gross, Harald, Gugger, Muriel, Guillén Matus, Dulce G., Helfrich, Eric J. N., Hempel, Benjamin-Florian, Hur, Jae-Seoun, Iorio, Marianna, Jensen, Paul R., Kang, Kyo Bin, Kaysser, Leonard, Kelleher, Neil L., Kim, Chung Sub, Kim, Ki Hyun, Koester, Irina, König, Gabriele M., Leao, Tiago, Lee, Seoung Rak, Lee, Yi-Yuan, Li, Xuanji, Little, Jessica C., Maloney, Katherine N., Männle, Daniel, Martin H., Christian, McAvoy, Andrew C., Metcalf, Willam W., Mohimani, Hosein, Molina-Santiago, Carlos, Moore, Bradley S., Mullowney, Michael W., Muskat, Mitchell, Nothias, Louis-Félix, O’Neill, Ellis C., Parkinson, Elizabeth I., Petras, Daniel, Piel, Jörn, Pierce, Emily C., Pires, Karine, Reher, Raphael, Romero, Diego, Roper, M. Caroline, Rust, Michael, Saad, Hamada, Saenz, Carmen, Sanchez, Laura M., Sørensen, Søren Johannes, Sosio, Margherita, Süssmuth, Roderich D., Sweeney, Douglas, Tahlan, Kapil, Thomson, Regan J., Tobias, Nicholas J., Trindade-Silva, Amaro E., van Wezel, Gilles P., Wang, Mingxun, Weldon, Kelly C., Zhang, Fan, Ziemert, Nadine, Duncan, Katherine R., Crüsemann, Max, Rogers, Simon, Dorrestein, Pieter C., Medema, Marnix H., van der Hooft, Justin J. J.
Publicado 2021