High-Affinity Recombinant Antibody Fragments (Fabs) Can Be Applied in Peptide Enrichment Immuno-MRM Assays

por Whiteaker, Jeffrey R., Zhao, Lei, Frisch, Christian, Ylera, Francisco, Harth, Stefan, Knappik, Achim, Paulovich, Amanda G.
Publicado 2014

Clinical Proteomics for Solid Organ Tissues

por Phipps, William S., Kilgore, Mark R., Kennedy, Jacob J., Whiteaker, Jeffrey R., Hoofnagle, Andrew N., Paulovich, Amanda G.
Publicado 2023

LTBK-03. Targeted mass spectrometry of serial CSF and serum specimens from children with diffuse intrinsic pontine glioma treated with intracranial B7-H3 CAR T cells

por Vitanza, Nicholas, Wilson, Ashley, Huang, Wenjun, Whiteaker, Jeffrey, Gust, Juliane, Orentas, Rimas, Gardner, Rebecca, Park, Julie, Jensen, Michael, Paulovich, Amanda
Publicado 2022

Quantification of Proteins Using Peptide Immunoaffinity Enrichment Coupled with Mass Spectrometry

por Zhao, Lei, Whiteaker, Jeffrey R., Pope, Matthew E., Kuhn, Eric, Jackson, Angela, Anderson, N. Leigh, Pearson, Terry W., Carr, Steven A., Paulovich, Amanda G.
Publicado 2011

Monitoring Both Extended and Tryptic Forms of Stable Isotope-Labeled Standard Peptides Provides an Internal Quality Control of Proteolytic Digestion in Targeted Mass Spectrometry-B...

por Lundeen, Rachel A., Kennedy, Jacob J., Murillo, Oscar D., Ivey, Richard G., Zhao, Lei, Schoenherr, Regine M., Hoofnagle, Andrew N., Wang, Pei, Whiteaker, Jeffrey R., Paulovich, Amanda G.
Publicado 2023

Rapid Multiplexed Proteomic Screening for Primary Immunodeficiency Disorders From Dried Blood Spots

por Collins, Christopher J., Chang, Irene J., Jung, Sunhee, Dayuha, Remwilyn, Whiteaker, Jeffrey R., Segundo, Gesmar R. S., Torgerson, Troy R., Ochs, Hans D., Paulovich, Amanda G., Hahn, Si Houn
Publicado 2018

Multiplexed Proteomic Analysis for Diagnosis and Screening of Five Primary Immunodeficiency Disorders From Dried Blood Spots

por Collins, Christopher J., Yi, Fan, Dayuha, Remwilyn, Whiteaker, Jeffrey R., Ochs, Hans D., Freeman, Alexandra, Su, Helen C., Paulovich, Amanda G., Segundo, Gesmar R. S., Torgerson, Troy, Hahn, Si Houn
Publicado 2020

Phase I/II results of ceralasertib as monotherapy or in combination with acalabrutinib in high-risk relapsed/refractory chronic lymphocytic leukemia

por Jurczak, Wojciech, Elmusharaf, Nagah, Fox, Christopher P., Townsend, William, Paulovich, Amanda G., Whiteaker, Jeffrey R., Krantz, Fanny, Wun, Chuan-Chuan, Parr, Graeme, Sharma, Shringi, Munugalavadla, Veerendra, Manwani, Richa, Dean, Emma, Munir, Talha
Publicado 2023

Panorama: A Targeted Proteomics Knowledge Base

por Sharma, Vagisha, Eckels, Josh, Taylor, Greg K., Shulman, Nicholas J., Stergachis, Andrew B., Joyner, Shannon A., Yan, Ping, Whiteaker, Jeffrey R., Halusa, Goran N., Schilling, Birgit, Gibson, Bradford W., Colangelo, Christopher M., Paulovich, Amanda G., Carr, Steven A., Jaffe, Jacob D., MacCoss, Michael J., MacLean, Brendan
Publicado 2014

TBIO-19. INTEGRATED GENOMIC, PROTEOMIC AND PHOSPHOPROTEOMIC ANALYSIS OF SEVEN TYPES OF PEDIATRIC BRAIN CANCER

por Petralia, Francesca, Tignor, Nicole, Rykunov, Dmitri, Revas, Boris, Chowdhury, Shrabanti, Krek, Azra, Raman, Pichae, Ji, Jiayi, Zhu, Yuankun, Ma, Weiping, Song, Xiaoyu, Fenyo, David, Gygi, Steven, Ivey, Richard, Iavarone, Antonio, Whiteaker, Jeffrey, Colaprico, Antonio, Nesvizhskii, Alexey, Rodriguez, Henry, Paulovich, Amanda, Hiltke, Tara, Resnick, Adam, Wang, Pei, Rood, Brian
Publicado 2020

Demonstrating the feasibility of large-scale development of standardized assays to quantify human proteins

por Kennedy, Jacob J., Abbatiello, Susan E., Kim, Kyunggon, Yan, Ping, Whiteaker, Jeffrey R., Lin, Chenwei, Kim, Jun Seok, Zhang, Yuzheng, Wang, Xianlong, Ivey, Richard G., Zhao, Lei, Min, Hophil, Lee, Youngju, Yu, Myeong-Hee, Yang, Eun Gyeong, Lee, Cheolju, Wang, Pei, Rodriguez, Henry, Kim, Youngsoo, Carr, Steven A., Paulovich, Amanda G.
Publicado 2013

A dataset describing a suite of novel antibody reagents for the RAS signaling network

por Schoenherr, Regine M., Huang, Dongqing, Voytovich, Uliana J., Ivey, Richard G., Kennedy, Jacob J., Saul, Richard G., Colantonio, Simona, Roberts, Rhonda R., Knotts, Joseph G., Kaczmarczyk, Jan A., Perry, Candice, Hewitt, Stephen M., Bocik, William, Whiteley, Gordon R., Hiltke, Tara, Boja, Emily S., Rodriguez, Henry, Whiteaker, Jeffrey R., Paulovich, Amanda G.
Publicado 2019

Internal Standard Triggered-Parallel Reaction Monitoring Mass Spectrometry Enables Multiplexed Quantification of Candidate Biomarkers in Plasma

por Kennedy, Jacob J., Whiteaker, Jeffrey R., Ivey, Richard G., Burian, Aura, Chowdhury, Shrabanti, Tsai, Chia-Feng, Liu, Tao, Lin, ChenWei, Murillo, Oscar D., Lundeen, Rachel A., Jones, Lisa A., Gafken, Philip R., Longton, Gary, Rodland, Karin D., Skates, Steven J., Landua, John, Wang, Pei, Lewis, Michael T., Paulovich, Amanda G.
Publicado 2022

pRAD50: a novel and clinically applicable pharmacodynamic biomarker of both ATM and ATR inhibition identified using mass spectrometry and immunohistochemistry

por Jones, Gemma N., Rooney, Claire, Griffin, Nicola, Roudier, Martine, Young, Lucy A., Garcia-Trinidad, Antonio, Hughes, Gareth D., Whiteaker, Jeffrey R., Wilson, Zena, Odedra, Rajesh, Zhao, Lei, Ivey, Richard G., Howat, William J., Harrington, Elizabeth A., Barrett, J. Carl, Ramos-Montoya, Antonio, Lau, Alan, Paulovich, Amanda G., Cadogan, Elaine B., Pierce, Andrew J.
Publicado 2018

Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection

por El-Khoury, Victoria, Schritz, Anna, Kim, Sang-Yoon, Lesur, Antoine, Sertamo, Katriina, Bernardin, François, Petritis, Konstantinos, Pirrotte, Patrick, Selinsky, Cheryl, Whiteaker, Jeffrey R., Zhang, Haizhen, Kennedy, Jacob J., Lin, Chenwei, Lee, Lik Wee, Yan, Ping, Tran, Nhan L., Inge, Landon J., Chalabi, Khaled, Decker, Georges, Bjerkvig, Rolf, Paulovich, Amanda G., Berchem, Guy, Kim, Yeoun Jin
Publicado 2020

A targeted proteomics–based pipeline for verification of biomarkers in plasma

por Whiteaker, Jeffrey R, Lin, Chenwei, Kennedy, Jacob, Hou, Liming, Trute, Mary, Sokal, Izabela, Yan, Ping, Schoenherr, Regine M, Zhao, Lei, Voytovich, Uliana J, Kelly-Spratt, Karen S, Krasnoselsky, Alexei, Gafken, Philip R, Hogan, Jason M, Jones, Lisa A, Wang, Pei, Amon, Lynn, Chodosh, Lewis A, Nelson, Peter S, McIntosh, Martin W, Kemp, Christopher J, Paulovich, Amanda G
Publicado 2011

Targeted mass-spectrometry-based assays enable multiplex quantification of receptor tyrosine kinase, MAP kinase, and AKT signaling

por Whiteaker, Jeffrey R., Sharma, Kanika, Hoffman, Melissa A., Kuhn, Eric, Zhao, Lei, Cocco, Alexandra R., Schoenherr, Regine M., Kennedy, Jacob J., Voytovich, Ulianna, Lin, Chenwei, Fang, Bin, Bowers, Kiah, Whiteley, Gordon, Colantonio, Simona, Bocik, William, Roberts, Rhonda, Hiltke, Tara, Boja, Emily, Rodriguez, Henry, McCormick, Frank, Holderfield, Matthew, Carr, Steven A., Koomen, John M., Paulovich, Amanda G.
Publicado 2021

Targeted Mass Spectrometry Enables Quantification of Novel Pharmacodynamic Biomarkers of ATM Kinase Inhibition

por Whiteaker, Jeffrey R., Wang, Tao, Zhao, Lei, Schoenherr, Regine M., Kennedy, Jacob J., Voytovich, Ulianna, Ivey, Richard G., Huang, Dongqing, Lin, Chenwei, Colantonio, Simona, Caceres, Tessa W., Roberts, Rhonda R., Knotts, Joseph G., Kaczmarczyk, Jan A., Blonder, Josip, Reading, Joshua J., Richardson, Christopher W., Hewitt, Stephen M., Garcia-Buntley, Sandra S., Bocik, William, Hiltke, Tara, Rodriguez, Henry, Harrington, Elizabeth A., Barrett, J. Carl, Lombardi, Benedetta, Marco-Casanova, Paola, Pierce, Andrew J., Paulovich, Amanda G.
Publicado 2021

A multiplexed assay for quantifying immunomodulatory proteins supports correlative studies in immunotherapy clinical trials

por Whiteaker, Jeffrey R., Zhao, Lei, Schoenherr, Regine M., Huang, Dongqing, Lundeen, Rachel A., Voytovich, Ulianna, Kennedy, Jacob J., Ivey, Richard G., Lin, Chenwei, Murillo, Oscar D., Lorentzen, Travis D., Colantonio, Simona, Caceres, Tessa W., Roberts, Rhonda R., Knotts, Joseph G., Reading, Joshua J., Perry, Candice D., Richardson, Christopher W., Garcia-Buntley, Sandra S., Bocik, William, Hewitt, Stephen M., Chowdhury, Shrabanti, Vandermeer, Jackie, Smith, Stephen D., Gopal, Ajay K., Ramchurren, Nirasha, Fling, Steven P., Wang, Pei, Paulovich, Amanda G.
Publicado 2023

Multiomic analysis identifies CPT1A as a potential therapeutic target in platinum-refractory, high-grade serous ovarian cancer

por Huang, Dongqing, Chowdhury, Shrabanti, Wang, Hong, Savage, Sara R., Ivey, Richard G., Kennedy, Jacob J., Whiteaker, Jeffrey R., Lin, Chenwei, Hou, Xiaonan, Oberg, Ann L., Larson, Melissa C., Eskandari, Najmeh, Delisi, Davide A., Gentile, Saverio, Huntoon, Catherine J., Voytovich, Uliana J., Shire, Zahra J., Yu, Qing, Gygi, Steven P., Hoofnagle, Andrew N., Herbert, Zachary T., Lorentzen, Travis D., Calinawan, Anna, Karnitz, Larry M., Weroha, S. John, Kaufmann, Scott H., Zhang, Bing, Wang, Pei, Birrer, Michael J., Paulovich, Amanda G.
Publicado 2021