Teen smoking, field cancerization, and a "critical period" hypothesis for lung cancer susceptibility.

por Wiencke, John K, Kelsey, Karl T
Publicado 2002

Cell-composition effects in the analysis of DNA methylation array data: a mathematical perspective

por Houseman, E Andres, Kelsey, Karl T, Wiencke, John K, Marsit, Carmen J
Publicado 2015

Quantitative reconstruction of leukocyte subsets using DNA methylation

por Accomando, William P, Wiencke, John K, Houseman, E Andres, Nelson, Heather H, Kelsey, Karl T
Publicado 2014

Tracing human stem cell lineage during development using DNA methylation

por Salas, Lucas A., Wiencke, John K., Koestler, Devin C., Zhang, Ze, Christensen, Brock C., Kelsey, Karl T.
Publicado 2018

Absence of an embryonic stem cell DNA methylation signature in human cancer

por Zhang, Ze, Wiencke, John K., Koestler, Devin C., Salas, Lucas A., Christensen, Brock C., Kelsey, Karl T.
Publicado 2019

HiTIMED: hierarchical tumor immune microenvironment epigenetic deconvolution for accurate cell type resolution in the tumor microenvironment using tumor-type-specific DNA methylati...

por Zhang, Ze, Wiencke, John K., Kelsey, Karl T., Koestler, Devin C., Christensen, Brock C., Salas, Lucas A.
Publicado 2022

An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray

por Salas, Lucas A., Koestler, Devin C., Butler, Rondi A., Hansen, Helen M., Wiencke, John K., Kelsey, Karl T., Christensen, Brock C.
Publicado 2018

Somatic Mutation Allelic Ratio Test Using ddPCR (SMART-ddPCR): An Accurate Method for Assessment of Preferential Allelic Imbalance in Tumor DNA

por de Smith, Adam J., Walsh, Kyle M., Hansen, Helen M., Endicott, Alyson A., Wiencke, John K., Metayer, Catherine, Wiemels, Joseph L.
Publicado 2015

Improving cell mixture deconvolution by identifying optimal DNA methylation libraries (IDOL)

por Koestler, Devin C., Jones, Meaghan J., Usset, Joseph, Christensen, Brock C., Butler, Rondi A., Kobor, Michael S., Wiencke, John K., Kelsey, Karl T.
Publicado 2016

Calculating detection limits and uncertainty of reference-based deconvolution of whole-blood DNA methylation data

por Bell-Glenn, Shelby, Salas, Lucas A, Molinaro, Annette M, Butler, Rondi A, Christensen, Brock C, Kelsey, Karl T, Wiencke, John K, Koestler, Devin C
Publicado 2023

Erratum to: Langevin SM, Houseman EA, Christensen BC, Wiencke JK, Nelson HH, Karagas MR, et al. The influence of aging, environmental exposures and local sequence features on the...

por Langevin, Scott M., Houseman, E. Andrés, Christensen, Brock C., Wiencke, John K., Nelson, Heather H., Karagas, Margaret R., Marsit, Carmen J., Kelsey, Karl T.
Publicado 2012

DNA methylation arrays as surrogate measures of cell mixture distribution

por Houseman, Eugene Andres, Accomando, William P, Koestler, Devin C, Christensen, Brock C, Marsit, Carmen J, Nelson, Heather H, Wiencke, John K, Kelsey, Karl T
Publicado 2012

Hierarchical deconvolution for extensive cell type resolution in the human brain using DNA methylation

por Zhang, Ze, Wiencke, John K., Kelsey, Karl T., Koestler, Devin C., Molinaro, Annette M., Pike, Steven C., Karra, Prasoona, Christensen, Brock C., Salas, Lucas A.
Publicado 2023

SNPLogic: an interactive single nucleotide polymorphism selection, annotation, and prioritization system

por Pico, Alexander R., Smirnov, Ivan V., Chang, Jeffrey S., Yeh, Ru-Fang, Wiemels, Joseph L., Wiencke, John K., Tihan, Tarik, Conklin, Bruce R., Wrensch, Margaret
Publicado 2009

Immune factors preceding diagnosis of glioma: a Prostate Lung Colorectal Ovarian Cancer Screening Trial nested case–control study

por Muskens, Ivo S, Zhou, Mi, Mccoy, Lucie, Bracci, Paige M, Hansen, Helen M, Gauderman, W James, Wiencke, John K, Wrensch, Margaret R, Wiemels, Joseph L
Publicado 2019

Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling

por Salas, Lucas A., Zhang, Ze, Koestler, Devin C., Butler, Rondi A., Hansen, Helen M., Molinaro, Annette M., Wiencke, John K., Kelsey, Karl T., Christensen, Brock C.
Publicado 2022

Assessment of immune cell profiles among post-menopausal women in the Women’s Health Initiative using DNA methylation-based methods

por Nissen, Emily, Reiner, Alexander, Liu, Simin, Wallace, Robert B., Molinaro, Annette M., Salas, Lucas A., Christensen, Brock C., Wiencke, John K., Koestler, Devin C., Kelsey, Karl T.
Publicado 2023

Comparative analysis of the DNA methylation landscape in CD4, CD8, and B memory lineages

por Zhang, Ze, Butler, Rondi, Koestler, Devin C., Bell-Glenn, Shelby, Warrier, Gayathri, Molinaro, Annette M., Christensen, Brock C., Wiencke, John K., Kelsey, Karl T., Salas, Lucas A.
Publicado 2022

Genome-Scale Methylation Analysis Identifies Immune Profiles and Age Acceleration Associations with Bladder Cancer Outcomes

por Chen, Ji-Qing, Salas, Lucas A., Wiencke, John K., Koestler, Devin C., Molinaro, Annette M., Andrew, Angeline S., Seigne, John D., Karagas, Margaret R., Kelsey, Karl T., Christensen, Brock C.
Publicado 2023

Immune profiles and DNA methylation alterations related with non-muscle-invasive bladder cancer outcomes

por Chen, Ji-Qing, Salas, Lucas A., Wiencke, John K., Koestler, Devin C., Molinaro, Annette M., Andrew, Angeline S., Seigne, John D., Karagas, Margaret R., Kelsey, Karl T., Christensen, Brock C.
Publicado 2022