Evaluation of Algorithm Performance in ChIP-Seq Peak Detection

por Wilbanks, Elizabeth G., Facciotti, Marc T.
Publicado 2010

A Monte Carlo-based framework enhances the discovery and interpretation of regulatory sequence motifs

por Seitzer, Phillip, Wilbanks, Elizabeth G, Larsen, David J, Facciotti, Marc T
Publicado 2012

Horizontal Gene Transfer and CRISPR Targeting Drive Phage-Bacterial Host Interactions and Coevolution in “Pink Berry” Marine Microbial Aggregates

por Kosmopoulos, James C., Campbell, Danielle E., Whitaker, Rachel J., Wilbanks, Elizabeth G.
Publicado 2023

Primer selection impacts specific population abundances but not community dynamics in a monthly time‐series 16S rRNA gene amplicon analysis of coastal marine bacterioplankton

por Wear, Emma K., Wilbanks, Elizabeth G., Nelson, Craig E., Carlson, Craig A.
Publicado 2018

Complete Genome Sequence of Halomonas sp. Strain FeN2, a Novel Cathode-Oxidizing Bacterium Isolated from Catalina Harbor Sediments

por Vu, Linda, Sackett, Joshua D., Leach, Edmund, Wilbanks, Elizabeth, Rowe, Annette R.
Publicado 2021

Genome-Scale Mutational Analysis of Cathode-Oxidizing Thioclava electrotropha ElOx9(T)

por Sackett, Joshua D., Kamble, Nitin, Leach, Edmund, Schuelke, Taruna, Wilbanks, Elizabeth, Rowe, Annette R.
Publicado 2022

Physiologic, Genomic, and Electrochemical Characterization of Two Heterotrophic Marine Sediment Microbes from the Idiomarina Genus

por Vinales, Jorge, Sackett, Joshua, Trutschel, Leah, Amir, Waleed, Norman, Casey, Leach, Edmund, Wilbanks, Elizabeth, Rowe, Annette
Publicado 2022

Metagenomic methylation patterns resolve bacterial genomes of unusual size and structural complexity

por Wilbanks, Elizabeth G., Doré, Hugo, Ashby, Meredith H., Heiner, Cheryl, Roberts, Richard J., Eisen, Jonathan A.
Publicado 2022

The Green Berry Consortia of the Sippewissett Salt Marsh: Millimeter-Sized Aggregates of Diazotrophic Unicellular Cyanobacteria

por Wilbanks, Elizabeth G., Salman-Carvalho, Verena, Jaekel, Ulrike, Humphrey, Parris T., Eisen, Jonathan A., Buckley, Daniel H., Zinder, Stephen H.
Publicado 2017

A workflow for genome-wide mapping of archaeal transcription factors with ChIP-seq

por Wilbanks, Elizabeth G., Larsen, David J., Neches, Russell Y., Yao, Andrew I., Wu, Chia-Ying, Kjolby, Rachel A. S., Facciotti, Marc T.
Publicado 2012

Microscale sulfur cycling in the phototrophic pink berry consortia of the Sippewissett Salt Marsh

por Wilbanks, Elizabeth G, Jaekel, Ulrike, Salman, Verena, Humphrey, Parris T, Eisen, Jonathan A, Facciotti, Marc T, Buckley, Daniel H, Zinder, Stephen H, Druschel, Gregory K, Fike, David A, Orphan, Victoria J
Publicado 2014

Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux

por Lynch, Erin A., Langille, Morgan G. I., Darling, Aaron, Wilbanks, Elizabeth G., Haltiner, Caitlin, Shao, Katie S. Y., Starr, Michael O., Teiling, Clotilde, Harkins, Timothy T., Edwards, Robert A., Eisen, Jonathan A., Facciotti, Marc T.
Publicado 2012

Candidatus Frankia Datiscae Dg1, the Actinobacterial Microsymbiont of Datisca glomerata, Expresses the Canonical nod Genes nodABC in Symbiosis with Its Host Plant

por Persson, Tomas, Battenberg, Kai, Demina, Irina V., Vigil-Stenman, Theoden, Vanden Heuvel, Brian, Pujic, Petar, Facciotti, Marc T., Wilbanks, Elizabeth G., O'Brien, Anna, Fournier, Pascale, Cruz Hernandez, Maria Antonia, Mendoza Herrera, Alberto, Médigue, Claudine, Normand, Philippe, Pawlowski, Katharina, Berry, Alison M.
Publicado 2015

Host-associated microbiomes drive structure and function of marine ecosystems

por Wilkins, Laetitia G. E., Leray, Matthieu, O’Dea, Aaron, Yuen, Benedict, Peixoto, Raquel S., Pereira, Tiago J., Bik, Holly M., Coil, David A., Duffy, J. Emmett, Herre, Edward Allen, Lessios, Harilaos A., Lucey, Noelle M., Mejia, Luis C., Rasher, Douglas B., Sharp, Koty H., Sogin, Emilia M., Thacker, Robert W., Vega Thurber, Rebecca, Wcislo, William T., Wilbanks, Elizabeth G., Eisen, Jonathan A.
Publicado 2019