MrBUMP: an automated pipeline for molecular replacement

por Keegan, Ronan M., Winn, Martyn D.
Publicado 2008

Ligand binding and dynamics of the monomeric epidermal growth factor receptor ectodomain

por Loeffler, Hannes H, Winn, Martyn D
Publicado 2013

Indexed variation graphs for efficient and accurate resistome profiling

por Rowe, Will P M, Winn, Martyn D
Publicado 2018

Overview and applications of map and model validation tools in the CCP-EM software suite

por Joseph, Agnel Praveen, Malhotra, Sony, Burnley, Tom, Winn, Martyn D.
Publicado 2022

K-mer clustering algorithm using a MapReduce framework: application to the parallelization of the Inchworm module of Trinity

por Kim, Chang Sik, Winn, Martyn D., Sachdeva, Vipin, Jordan, Kirk E.
Publicado 2017

Redeployment of automated MrBUMP search-model identification for map fitting in cryo-EM

por Simpkin, Adam J., Winn, Martyn D., Rigden, Daniel J., Keegan, Ronan M.
Publicado 2021

Application of the AMPLE cluster-and-truncate approach to NMR structures for molecular replacement

por Bibby, Jaclyn, Keegan, Ronan M., Mayans, Olga, Winn, Martyn D., Rigden, Daniel J.
Publicado 2013

Atomic model validation using the CCP-EM software suite

por Joseph, Agnel Praveen, Olek, Mateusz, Malhotra, Sony, Zhang, Peijun, Cowtan, Kevin, Burnley, Tom, Winn, Martyn D.
Publicado 2022

Evaluating the solution from MrBUMP and BALBES

por Keegan, Ronan M., Long, Fei, Fazio, Vincent J., Winn, Martyn D., Murshudov, Garib N., Vagin, Alexei A.
Publicado 2011

Routine phasing of coiled-coil protein crystal structures with AMPLE

por Thomas, Jens M. H., Keegan, Ronan M., Bibby, Jaclyn, Winn, Martyn D., Mayans, Olga, Rigden, Daniel J.
Publicado 2015

Residue contacts predicted by evolutionary covariance extend the application of ab initio molecular replacement to larger and more challenging protein folds

por Simkovic, Felix, Thomas, Jens M. H., Keegan, Ronan M., Winn, Martyn D., Mayans, Olga, Rigden, Daniel J.
Publicado 2016

Exploring the speed and performance of molecular replacement with AMPLE using QUARK ab initio protein models

por Keegan, Ronan M., Bibby, Jaclyn, Thomas, Jens, Xu, Dong, Zhang, Yang, Mayans, Olga, Winn, Martyn D., Rigden, Daniel J.
Publicado 2015

Ensembles generated from crystal structures of single distant homologues solve challenging molecular-replacement cases in AMPLE

por Rigden, Daniel J., Thomas, Jens M. H., Simkovic, Felix, Simpkin, Adam, Winn, Martyn D., Mayans, Olga, Keegan, Ronan M.
Publicado 2018

Phaser crystallographic software

por McCoy, Airlie J., Grosse-Kunstleve, Ralf W., Adams, Paul D., Winn, Martyn D., Storoni, Laurent C., Read, Randy J.
Publicado 2007

REFMAC5 for the refinement of macromolecular crystal structures

por Murshudov, Garib N., Skubák, Pavol, Lebedev, Andrey A., Pannu, Navraj S., Steiner, Roberto A., Nicholls, Robert A., Winn, Martyn D., Long, Fei, Vagin, Alexei A.
Publicado 2011

Streaming histogram sketching for rapid microbiome analytics

por Rowe, Will PM, Carrieri, Anna Paola, Alcon-Giner, Cristina, Caim, Shabhonam, Shaw, Alex, Sim, Kathleen, Kroll, J. Simon, Hall, Lindsay J., Pyzer-Knapp, Edward O., Winn, Martyn D.
Publicado 2019

Recent developments in MrBUMP: better search-model preparation, graphical interaction with search models, and solution improvement and assessment

por Keegan, Ronan M., McNicholas, Stuart J., Thomas, Jens M. H., Simpkin, Adam J., Simkovic, Felix, Uski, Ville, Ballard, Charles C., Winn, Martyn D., Wilson, Keith S., Rigden, Daniel J.
Publicado 2018

Overview of the CCP4 suite and current developments

por Winn, Martyn D., Ballard, Charles C., Cowtan, Kevin D., Dodson, Eleanor J., Emsley, Paul, Evans, Phil R., Keegan, Ronan M., Krissinel, Eugene B., Leslie, Andrew G. W., McCoy, Airlie, McNicholas, Stuart J., Murshudov, Garib N., Pannu, Navraj S., Potterton, Elizabeth A., Powell, Harold R., Read, Randy J., Vagin, Alexei, Wilson, Keith S.
Publicado 2011

EGFR oligomerization organizes kinase-active dimers into competent signalling platforms

por Needham, Sarah R., Roberts, Selene K., Arkhipov, Anton, Mysore, Venkatesh P., Tynan, Christopher J., Zanetti-Domingues, Laura C., Kim, Eric T., Losasso, Valeria, Korovesis, Dimitrios, Hirsch, Michael, Rolfe, Daniel J., Clarke, David T., Winn, Martyn D., Lajevardipour, Alireza, Clayton, Andrew H. A., Pike, Linda J., Perani, Michela, Parker, Peter J., Shan, Yibing, Shaw, David E., Martin-Fernandez, Marisa L.
Publicado 2016

The CCP4 suite: integrative software for macromolecular crystallography

por Agirre, Jon, Atanasova, Mihaela, Bagdonas, Haroldas, Ballard, Charles B., Baslé, Arnaud, Beilsten-Edmands, James, Borges, Rafael J., Brown, David G., Burgos-Mármol, J. Javier, Berrisford, John M., Bond, Paul S., Caballero, Iracema, Catapano, Lucrezia, Chojnowski, Grzegorz, Cook, Atlanta G., Cowtan, Kevin D., Croll, Tristan I., Debreczeni, Judit É., Devenish, Nicholas E., Dodson, Eleanor J., Drevon, Tarik R., Emsley, Paul, Evans, Gwyndaf, Evans, Phil R., Fando, Maria, Foadi, James, Fuentes-Montero, Luis, Garman, Elspeth F., Gerstel, Markus, Gildea, Richard J., Hatti, Kaushik, Hekkelman, Maarten L., Heuser, Philipp, Hoh, Soon Wen, Hough, Michael A., Jenkins, Huw T., Jiménez, Elisabet, Joosten, Robbie P., Keegan, Ronan M., Keep, Nicholas, Krissinel, Eugene B., Kolenko, Petr, Kovalevskiy, Oleg, Lamzin, Victor S., Lawson, David M., Lebedev, Andrey A., Leslie, Andrew G. W., Lohkamp, Bernhard, Long, Fei, Malý, Martin, McCoy, Airlie J., McNicholas, Stuart J., Medina, Ana, Millán, Claudia, Murray, James W., Murshudov, Garib N., Nicholls, Robert A., Noble, Martin E. M., Oeffner, Robert, Pannu, Navraj S., Parkhurst, James M., Pearce, Nicholas, Pereira, Joana, Perrakis, Anastassis, Powell, Harold R., Read, Randy J., Rigden, Daniel J., Rochira, William, Sammito, Massimo, Sánchez Rodríguez, Filomeno, Sheldrick, George M., Shelley, Kathryn L., Simkovic, Felix, Simpkin, Adam J., Skubak, Pavol, Sobolev, Egor, Steiner, Roberto A., Stevenson, Kyle, Tews, Ivo, Thomas, Jens M. H., Thorn, Andrea, Valls, Josep Triviño, Uski, Ville, Usón, Isabel, Vagin, Alexei, Velankar, Sameer, Vollmar, Melanie, Walden, Helen, Waterman, David, Wilson, Keith S., Winn, Martyn D., Winter, Graeme, Wojdyr, Marcin, Yamashita, Keitaro
Publicado 2023