Simultaneous clustering of gene expression data with clinical chemistry and pathological evaluations reveals phenotypic prototypes

por Bushel, Pierre R, Wolfinger, Russell D, Gibson, Greg
Publicado 2007

An Integrated Approach for the Analysis of Biological Pathways using Mixed Models

por Wang, Lily, Zhang, Bing, Wolfinger, Russell D., Chen, Xi
Publicado 2008

Carbohydrate Microarrays

por Wang, Denong, Tang, Jin, Wolfinger, Russell D., Carroll, Gregory T.
Publicado 2015

Kernel density weighted loess normalization improves the performance of detection within asymmetrical data

por Hsieh, Wen-Ping, Chu, Tzu-Ming, Lin, Yu-Min, Wolfinger, Russell D
Publicado 2011

Maternal Influences on the Transmission of Leukocyte Gene Expression Profiles in Population Samples from Brisbane, Australia

por Mason, Elizabeth, Tronc, Graham, Nones, Katia, Matigian, Nick, Kim, Jinhee, Aronow, Bruce J., Wolfinger, Russell D., Wells, Christine, Gibson, Greg
Publicado 2010

Comparison of transcriptional responses in liver tissue and primary hepatocyte cell cultures after exposure to hexahydro-1, 3, 5-trinitro-1, 3, 5-triazine

por Perkins, Edward J, Bao, Wenjun, Guan, Xin, Ang, Choo-Yaw, Wolfinger, Russell D, Chu, Tzu-Ming, Meyer, Sharon A, Inouye, Laura S
Publicado 2006

Geographical Genomics of Human Leukocyte Gene Expression Variation in Southern Morocco

por Idaghdour, Youssef, Czika, Wendy, Shianna, Kevin V., Lee, S. Hong, Visscher, Peter M., Martin, Hilary C., Miclaus, Kelci, Jadallah, Sami J., Goldstein, David B., Wolfinger, Russell D., Gibson, Greg
Publicado 2009

Development and Application of Bovine and Porcine Oligonucleotide Arrays with Protein-Based Annotation

por Garbe, John R., Elsik, Christine G., Antoniou, Eric, Reecy, James M., Clark, Karl J., Venkatraman, Anand, Kim, Jae-Woo, Schnabel, Robert D., Michael Dickens, C., Wolfinger, Russell D., Fahrenkrug, Scott C., Taylor, Jeremy F.
Publicado 2010

Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

por Wolfinger, Russell D., Beedanagari, Sudheer, Boitier, Eric, Chen, Tao, Couttet, Philippe, Ellinger-Ziegelbauer, Heidrun, Guillemain, Gregory, Mariet, Claire, Mouritzen, Peter, O’Lone, Raegan, Pine, P. Scott, Sharapova, Tatiana, Yan, Jian, Yuen, Peter S., Thompson, Karol L.
Publicado 2018

Breeding-assisted genomics: Applying meta-GWAS for milling and baking quality in CIMMYT wheat breeding program

por Battenfield, Sarah D., Sheridan, Jaime L., Silva, Luciano D. C. E., Miclaus, Kelci J., Dreisigacker, Susanne, Wolfinger, Russell D., Peña, Roberto J., Singh, Ravi P., Jackson, Eric W., Fritz, Allan. K., Guzmán, Carlos, Poland, Jesse A.
Publicado 2018

Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories

por Boedigheimer, Michael J, Wolfinger, Russell D, Bass, Michael B, Bushel, Pierre R, Chou, Jeff W, Cooper, Matthew, Corton, J Christopher, Fostel, Jennifer, Hester, Susan, Lee, Janice S, Liu, Fenglong, Liu, Jie, Qian, Hui-Rong, Quackenbush, John, Pettit, Syril, Thompson, Karol L
Publicado 2008

Technical Reproducibility of Genotyping SNP Arrays Used in Genome-Wide Association Studies

por Hong, Huixiao, Xu, Lei, Liu, Jie, Jones, Wendell D., Su, Zhenqiang, Ning, Baitang, Perkins, Roger, Ge, Weigong, Miclaus, Kelci, Zhang, Li, Park, Kyunghee, Green, Bridgett, Han, Tao, Fang, Hong, Lambert, Christophe G., Vega, Silvia C., Lin, Simon M., Jafari, Nadereh, Czika, Wendy, Wolfinger, Russell D., Goodsaid, Federico, Tong, Weida, Shi, Leming
Publicado 2012

A DREAM Challenge to Build Prediction Models for Short-Term Discontinuation of Docetaxel in Metastatic Castration-Resistant Prostate Cancer

por Seyednasrollah, Fatemeh, Koestler, Devin C., Wang, Tao, Piccolo, Stephen R., Vega, Roberto, Greiner, Russell, Fuchs, Christiane, Gofer, Eyal, Kumar, Luke, Wolfinger, Russell D., Kanigel Winner, Kimberly, Bare, Chris, Neto, Elias Chaibub, Yu, Thomas, Shen, Liji, Abdallah, Kald, Norman, Thea, Stolovitzky, Gustavo, Soule, Howard R., Sweeney, Christopher J., Ryan, Charles J., Scher, Howard I., Sartor, Oliver, Elo, Laura L., Zhou, Fang Liz, Guinney, Justin, Costello, James C.
Publicado 2017

A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages

por Yu, Ying, Fuscoe, James C., Zhao, Chen, Guo, Chao, Jia, Meiwen, Qing, Tao, Bannon, Desmond I., Lancashire, Lee, Bao, Wenjun, Du, Tingting, Luo, Heng, Su, Zhenqiang, Jones, Wendell D., Moland, Carrie L., Branham, William S., Qian, Feng, Ning, Baitang, Li, Yan, Hong, Huixiao, Guo, Lei, Mei, Nan, Shi, Tieliu, Wang, Kevin Y., Wolfinger, Russell D., Nikolsky, Yuri, Walker, Stephen J., Duerksen-Hughes, Penelope, Mason, Christopher E., Tong, Weida, Thierry-Mieg, Jean, Thierry-Mieg, Danielle, Shi, Leming, Wang, Charles
Publicado 2014

Genomic Convergence Analysis of Schizophrenia: mRNA Sequencing Reveals Altered Synaptic Vesicular Transport in Post-Mortem Cerebellum

por Mudge, Joann, Miller, Neil A., Khrebtukova, Irina, Lindquist, Ingrid E., May, Gregory D., Huntley, Jim J., Luo, Shujun, Zhang, Lu, van Velkinburgh, Jennifer C., Farmer, Andrew D., Lewis, Sharon, Beavis, William D., Schilkey, Faye D., Virk, Selene M., Black, C. Forrest, Myers, M. Kathy, Mader, Lar C., Langley, Ray J., Utsey, John P., Kim, Ryan W., Roberts, Rosalinda C., Khalsa, Sat Kirpal, Garcia, Meredith, Ambriz-Griffith, Victoria, Harlan, Richard, Czika, Wendy, Martin, Stanton, Wolfinger, Russell D., Perrone-Bizzozero, Nora I., Schroth, Gary P., Kingsmore, Stephen F.
Publicado 2008

The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies

por Shi, Leming, Jones, Wendell D, Jensen, Roderick V, Harris, Stephen C, Perkins, Roger G, Goodsaid, Federico M, Guo, Lei, Croner, Lisa J, Boysen, Cecilie, Fang, Hong, Qian, Feng, Amur, Shashi, Bao, Wenjun, Barbacioru, Catalin C, Bertholet, Vincent, Cao, Xiaoxi Megan, Chu, Tzu-Ming, Collins, Patrick J, Fan, Xiao-hui, Frueh, Felix W, Fuscoe, James C, Guo, Xu, Han, Jing, Herman, Damir, Hong, Huixiao, Kawasaki, Ernest S, Li, Quan-Zhen, Luo, Yuling, Ma, Yunqing, Mei, Nan, Peterson, Ron L, Puri, Raj K, Shippy, Richard, Su, Zhenqiang, Sun, Yongming Andrew, Sun, Hongmei, Thorn, Brett, Turpaz, Yaron, Wang, Charles, Wang, Sue Jane, Warrington, Janet A, Willey, James C, Wu, Jie, Xie, Qian, Zhang, Liang, Zhang, Lu, Zhong, Sheng, Wolfinger, Russell D, Tong, Weida
Publicado 2008

Comparison of RNA-seq and microarray-based models for clinical endpoint prediction

por Zhang, Wenqian, Yu, Ying, Hertwig, Falk, Thierry-Mieg, Jean, Zhang, Wenwei, Thierry-Mieg, Danielle, Wang, Jian, Furlanello, Cesare, Devanarayan, Viswanath, Cheng, Jie, Deng, Youping, Hero, Barbara, Hong, Huixiao, Jia, Meiwen, Li, Li, Lin, Simon M, Nikolsky, Yuri, Oberthuer, André, Qing, Tao, Su, Zhenqiang, Volland, Ruth, Wang, Charles, Wang, May D., Ai, Junmei, Albanese, Davide, Asgharzadeh, Shahab, Avigad, Smadar, Bao, Wenjun, Bessarabova, Marina, Brilliant, Murray H., Brors, Benedikt, Chierici, Marco, Chu, Tzu-Ming, Zhang, Jibin, Grundy, Richard G., He, Min Max, Hebbring, Scott, Kaufman, Howard L., Lababidi, Samir, Lancashire, Lee J., Li, Yan, Lu, Xin X., Luo, Heng, Ma, Xiwen, Ning, Baitang, Noguera, Rosa, Peifer, Martin, Phan, John H., Roels, Frederik, Rosswog, Carolina, Shao, Susan, Shen, Jie, Theissen, Jessica, Tonini, Gian Paolo, Vandesompele, Jo, Wu, Po-Yen, Xiao, Wenzhong, Xu, Joshua, Xu, Weihong, Xuan, Jiekun, Yang, Yong, Ye, Zhan, Dong, Zirui, Zhang, Ke K., Yin, Ye, Zhao, Chen, Zheng, Yuanting, Wolfinger, Russell D., Shi, Tieliu, Malkas, Linda H., Berthold, Frank, Wang, Jun, Tong, Weida, Shi, Leming, Peng, Zhiyu, Fischer, Matthias
Publicado 2015