Kraken: ultrafast metagenomic sequence classification using exact alignments

por Wood, Derrick E, Salzberg, Steven L
Publicado 2014

Releasing the Kraken

por Salzberg, Steven L., Wood, Derrick E.
Publicado 2021

EDGE-pro: Estimated Degree of Gene Expression in Prokaryotic Genomes

por Magoc, Tanja, Wood, Derrick, Salzberg, Steven L.
Publicado 2013

Improved metagenomic analysis with Kraken 2

por Wood, Derrick E., Lu, Jennifer, Langmead, Ben
Publicado 2019

Unexpected cross-species contamination in genome sequencing projects

por Merchant, Samier, Wood, Derrick E., Salzberg, Steven L.
Publicado 2014

Thousands of missed genes found in bacterial genomes and their analysis with COMBREX

por Wood, Derrick E, Lin, Henry, Levy-Moonshine, Ami, Swaminathan, Rajiswari, Chang, Yi-Chien, Anton, Brian P, Osmani, Lais, Steffen, Martin, Kasif, Simon, Salzberg, Steven L
Publicado 2012

Automated next-generation profiling of genomic alterations in human cancers

por Keefer, Laurel A., White, James R., Wood, Derrick E., Gerding, Kelly M. R., Valkenburg, Kenneth C., Riley, David, Gault, Christopher, Papp, Eniko, Vollmer, Christine M., Greer, Amy, Hernandez, James, McGregor, Paul M., Zingone, Adriana, Ryan, Bríd M., Deak, Kristen, McCall, Shannon J., Datto, Michael B., Prescott, James L., Thompson, John F., Cerqueira, Gustavo C., Jones, Siân, Simmons, John K., McElhinny, Abigail, Dickey, Jennifer, Angiuoli, Samuel V., Diaz, Luis A., Velculescu, Victor E., Sausen, Mark
Publicado 2022