'SEEDY' (Simulation of Evolutionary and Epidemiological Dynamics): An R Package to Follow Accumulation of Within-Host Mutation in Pathogens

por Worby, Colin J., Read, Timothy D.
Publicado 2015

Face mask use in the general population and optimal resource allocation during the COVID-19 pandemic

por Worby, Colin J., Chang, Hsiao-Han
Publicado 2020

Face mask use in the general population and optimal resource allocation during the COVID-19 pandemic

por Worby, Colin J., Chang, Hsiao-Han
Publicado 2020

On the Role of Different Age Groups and Pertussis Vaccines During the 2012 Outbreak in Wisconsin

por Goldstein, Edward, Worby, Colin J, Lipsitch, Marc
Publicado 2018

Within-Host Bacterial Diversity Hinders Accurate Reconstruction of Transmission Networks from Genomic Distance Data

por Worby, Colin J., Lipsitch, Marc, Hanage, William P.
Publicado 2014

Shared Genomic Variants: Identification of Transmission Routes Using Pathogen Deep-Sequence Data

por Worby, Colin J, Lipsitch, Marc, Hanage, William P
Publicado 2017

Phylogeography of rubella virus in Asia: Vaccination and demography shape synchronous outbreaks

por Bozick, Brooke A., Worby, Colin J., Metcalf, C. Jessica E.
Publicado 2019

The Distribution of Pairwise Genetic Distances: A Tool for Investigating Disease Transmission

por Worby, Colin J., Chang, Hsiao-Han, Hanage, William P., Lipsitch, Marc
Publicado 2014

Examining the role of different age groups, and of vaccination during the 2012 Minnesota pertussis outbreak

por Worby, Colin J., Kenyon, Cynthia, Lynfield, Ruth, Lipsitch, Marc, Goldstein, Edward
Publicado 2015

Bayesian reconstruction of transmission within outbreaks using genomic variants

por De Maio, Nicola, Worby, Colin J., Wilson, Daniel J., Stoesser, Nicole
Publicado 2018

Model diagnostics and refinement for phylodynamic models

por Lau, Max S. Y., Grenfell, Bryan T., Worby, Colin J., Gibson, Gavin J.
Publicado 2019

Establishing the role of the gut microbiota in susceptibility to recurrent urinary tract infections

por Worby, Colin J., Olson, Benjamin S., Dodson, Karen W., Earl, Ashlee M., Hultgren, Scott J.
Publicado 2022

Penicillin Resistance of Nonvaccine Type Pneumococcus before and after PCV13 Introduction, United States

por Andam, Cheryl P., Worby, Colin J., Gierke, Ryan, McGee, Lesley, Pilishvili, Tamara, Hanage, William P.
Publicado 2017

Impact of mupirocin resistance on the transmission and control of healthcare-associated MRSA

por Deeny, Sarah R., Worby, Colin J., Tosas Auguet, Olga, Cooper, Ben S., Edgeworth, Jonathan, Cookson, Barry, Robotham, Julie V.
Publicado 2015

Estimating the Effectiveness of Isolation and Decolonization Measures in Reducing Transmission of Methicillin-resistant Staphylococcus aureus in Hospital General Wards

por Worby, Colin J., Jeyaratnam, Dakshika, Robotham, Julie V., Kypraios, Theodore, O'Neill, Philip D., De Angelis, Daniela, French, Gary, Cooper, Ben S.
Publicado 2013

Identifying the effect of patient sharing on between-hospital genetic differentiation of methicillin-resistant Staphylococcus aureus

por Chang, Hsiao-Han, Dordel, Janina, Donker, Tjibbe, Worby, Colin J., Feil, Edward J., Hanage, William P., Bentley, Stephen D., Huang, Susan S., Lipsitch, Marc
Publicado 2016

Strain Tracking with Uncertainty Quantification

por Kim, Younhun, Worby, Colin J., Acharya, Sawal, van Dijk, Lucas R., Alfonsetti, Daniel, Gromko, Zackary, Azimzadeh, Philippe, Dodson, Karen, Gerber, Georg, Hultgren, Scott, Earl, Ashlee M., Berger, Bonnie, Gibson, Travis E.
Publicado 2023

StrainGE: a toolkit to track and characterize low-abundance strains in complex microbial communities

por van Dijk, Lucas R., Walker, Bruce J., Straub, Timothy J., Worby, Colin J., Grote, Alexandra, Schreiber, Henry L., Anyansi, Christine, Pickering, Amy J., Hultgren, Scott J., Manson, Abigail L., Abeel, Thomas, Earl, Ashlee M.
Publicado 2022

Development of a prediction model for the acquisition of extended spectrum beta-lactam-resistant organisms in U.S. international travellers

por Brown, David Garrett, Worby, Colin J, Pender, Melissa A, Brintz, Ben J, Ryan, Edward T, Sridhar, Sushmita, Oliver, Elizabeth, Harris, Jason B, Turbett, Sarah E, Rao, Sowmya R, Earl, Ashlee M, LaRocque, Regina C, Leung, Daniel T
Publicado 2023

Acquisition and Long-term Carriage of Multidrug-Resistant Organisms in US International Travelers

por Worby, Colin J, Earl, Ashlee M, Turbett, Sarah E, Becker, Margaret, Rao, Sowmya R, Oliver, Elizabeth, Taylor Walker, Allison, Walters, Maroya, Kelly, Paul, Leung, Daniel T, Knouse, Mark, Hagmann, Stefan H F, Ryan, Edward T, LaRocque, Regina C
Publicado 2020