chromVAR: Inferring transcription factor-associated accessibility from single-cell epigenomic data

por Schep, Alicia N., Wu, Beijing, Buenrostro, Jason D., Greenleaf, William J.
Publicado 2017

Roles of the Developmental Regulator unc-62/Homothorax in Limiting Longevity in Caenorhabditis elegans

por Van Nostrand, Eric L., Sánchez-Blanco, Adolfo, Wu, Beijing, Nguyen, Andy, Kim, Stuart K.
Publicado 2013

Single-cell epigenomic variability reveals functional cancer heterogeneity

por Litzenburger, Ulrike M., Buenrostro, Jason D., Wu, Beijing, Shen, Ying, Sheffield, Nathan C., Kathiria, Arwa, Greenleaf, William J., Chang, Howard Y.
Publicado 2017

Single-cell chromatin accessibility reveals principles of regulatory variation

por Buenrostro, Jason D., Wu, Beijing, Litzenburger, Ulrike M., Ruff, Dave, Gonzales, Michael L., Snyder, Michael P., Chang, Howard Y., Greenleaf, William J.
Publicado 2015

Lineage-specific and single cell chromatin accessibility charts human hematopoiesis and leukemia evolution

por Corces, M. Ryan, Buenrostro, Jason D., Wu, Beijing, Greenside, Peyton G., Chan, Steven M., Koenig, Julie L., Snyder, Michael P., Pritchard, Jonathan K., Kundaje, Anshul, Greenleaf, William J., Majeti, Ravindra, Chang, Howard Y.
Publicado 2016

Regulatory analysis of the C. elegans genome with spatiotemporal resolution

por Araya, Carlos L., Kawli, Trupti, Kundaje, Anshul, Jiang, Lixia, Wu, Beijing, Vafeados, Dionne, Terrell, Robert, Weissdepp, Peter, Gevirtzman, Louis, Mace, Daniel, Niu, Wei, Boyle, Alan P., Xie, Dan, Ma, Lijia, Murray, John I., Reinke, Valerie, Waterston, Robert H., Snyder, Michael
Publicado 2014

Landscape of stimulation-responsive chromatin across diverse human immune cells

por Calderon, Diego, Nguyen, Michelle L. T., Mezger, Anja, Kathiria, Arwa, Müller, Fabian, Nguyen, Vinh, Lescano, Ninnia, Wu, Beijing, Trombetta, John, Ribado, Jessica V., Knowles, David A., Gao, Ziyue, Blaeschke, Franziska, Parent, Audrey V., Burt, Trevor D., Anderson, Mark S., Criswell, Lindsey A., Greenleaf, William J., Marson, Alexander, Pritchard, Jonathan K.
Publicado 2019

Transcript-indexed ATAC-seq for precision immune profiling

por Satpathy, Ansuman T., Saligrama, Naresha, Buenrostro, Jason D., Wei, Yuning, Wu, Beijing, Rubin, Adam J., Granja, Jeffrey M., Lareau, Caleb A., Li, Rui, Qi, Yanyan, Parker, Kevin R., Mumbach, Maxwell R., Serratelli, William S., Gennert, David G., Schep, Alicia N., Corces, M. Ryan, Khodadoust, Michael S., Kim, Youn H., Khavari, Paul A., Greenleaf, William J., Davis, Mark M., Chang, Howard Y.
Publicado 2018