dnAQET: a framework to compute a consolidated metric for benchmarking quality of de novo assemblies

por Yavas, Gokhan, Hong, Huixiao, Xiao, Wenming
Publicado 2019

Direct comparison of performance of single nucleotide variant calling in human genome with alignment-based and assembly-based approaches

por Wu, Leihong, Yavas, Gokhan, Hong, Huixiao, Tong, Weida, Xiao, Wenming
Publicado 2017

Challenges, Solutions, and Quality Metrics of Personal Genome Assembly in Advancing Precision Medicine

por Xiao, Wenming, Wu, Leihong, Yavas, Gokhan, Simonyan, Vahan, Ning, Baitang, Hong, Huixiao
Publicado 2016

Effects of Lung Protective Ventilation on the Cognitive Function Level of Patients with Esophageal Cancer

por WEI, Shuming, LI, Shengde, DONG, He, XIAO, Wenming, LI, Mingsheng, CHU, Haichen
Publicado 2019

Cross-platform expression profiling demonstrates that SV40 small tumor antigen activates Notch, Hedgehog, and Wnt signaling in human cells

por Ali-Seyed, Mohamed, Laycock, Noelani, Karanam, Suresh, Xiao, Wenming, Blair, Eric T, Moreno, Carlos S
Publicado 2006

A gain-of-function CCR4 mutations in adult T-cell leukemia/lymphoma (ATL) enhance the chemotactic abilities and P13K/AKT activation

por Nakagawa, Masao, Schmitz, Roland, Xiao, Wenming, Yang, Yandan, Waldmann, Thomas A, Staudt, Louis M
Publicado 2015

A Rat α-Fetoprotein Binding Activity Prediction Model to Facilitate Assessment of the Endocrine Disruption Potential of Environmental Chemicals

por Hong, Huixiao, Shen, Jie, Ng, Hui Wen, Sakkiah, Sugunadevi, Ye, Hao, Ge, Weigong, Gong, Ping, Xiao, Wenming, Tong, Weida
Publicado 2016

Application of genome analysis strategies in the clinical testing for pediatric diseases

por Jin, Yaqiong, Zhang, Li, Ning, Baitang, Hong, Huixiao, Xiao, Wenming, Tong, Weida, Tao, Yiran, Ni, Xin, Shi, Tieliu, Guo, Yongli
Publicado 2018

A multi-center cross-platform single-cell RNA sequencing reference dataset

por Chen, Xin, Yang, Zhaowei, Chen, Wanqiu, Zhao, Yongmei, Farmer, Andrew, Tran, Bao, Furtak, Vyacheslav, Moos, Malcolm, Xiao, Wenming, Wang, Charles
Publicado 2021

Gain-of-function CCR4 mutations in adult T cell leukemia/lymphoma

por Nakagawa, Masao, Schmitz, Roland, Xiao, Wenming, Goldman, Carolyn K., Xu, Weihong, Yang, Yandan, Yu, Xin, Waldmann, Thomas A., Staudt, Louis M.
Publicado 2014

Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays

por Wang, Yulei, Barbacioru, Catalin, Hyland, Fiona, Xiao, Wenming, Hunkapiller, Kathryn L, Blake, Julie, Chan, Frances, Gonzalez, Carolyn, Zhang, Lu, Samaha, Raymond R
Publicado 2006

Personalized genome assembly for accurate cancer somatic mutation discovery using tumor-normal paired reference samples

por Xiao, Chunlin, Chen, Zhong, Chen, Wanqiu, Padilla, Cory, Colgan, Michael, Wu, Wenjun, Fang, Li-Tai, Liu, Tiantian, Yang, Yibin, Schneider, Valerie, Wang, Charles, Xiao, Wenming
Publicado 2022

Achieving robust somatic mutation detection with deep learning models derived from reference data sets of a cancer sample

por Sahraeian, Sayed Mohammad Ebrahim, Fang, Li Tai, Karagiannis, Konstantinos, Moos, Malcolm, Smith, Sean, Santana-Quintero, Luis, Xiao, Chunlin, Colgan, Michael, Hong, Huixiao, Mohiyuddin, Marghoob, Xiao, Wenming
Publicado 2022

Similarities and differences between variants called with human reference genome HG19 or HG38

por Pan, Bohu, Kusko, Rebecca, Xiao, Wenming, Zheng, Yuanting, Liu, Zhichao, Xiao, Chunlin, Sakkiah, Sugunadevi, Guo, Wenjing, Gong, Ping, Zhang, Chaoyang, Ge, Weigong, Shi, Leming, Tong, Weida, Hong, Huixiao
Publicado 2019

Correction to: Similarities and differences between variants called with human reference genome HG19 or HG38

por Pan, Bohu, Kusko, Rebecca, Xiao, Wenming, Zheng, Yuanting, Liu, Zhichao, Xiao, Chunlin, Sakkiah, Sugunadevi, Guo, Wenjing, Gong, Ping, Zhang, Chaoyang, Ge, Weigong, Shi, Leming, Tong, Weida, Hong, Huixiao
Publicado 2019

An integrated transcriptome and epigenome analysis identifies a novel candidate gene for pancreatic cancer

por Jia, Jinping, Parikh, Hemang, Xiao, Wenming, Hoskins, Jason W, Pflicke, Holger, Liu, Xuelu, Collins, Irene, Zhou, Weiyin, Wang, Zhaoming, Powell, John, Thorgeirsson, Snorri S, Rudloff, Udo, Petersen, Gloria M, Amundadottir, Laufey T
Publicado 2013

The Quartet Data Portal: integration of community-wide resources for multiomics quality control

por Yang, Jingcheng, Liu, Yaqing, Shang, Jun, Chen, Qiaochu, Chen, Qingwang, Ren, Luyao, Zhang, Naixin, Yu, Ying, Li, Zhihui, Song, Yueqiang, Yang, Shengpeng, Scherer, Andreas, Tong, Weida, Hong, Huixiao, Xiao, Wenming, Shi, Leming, Zheng, Yuanting
Publicado 2023

Genomic and Transcriptomic Characterization Links Cell Lines with Aggressive Head and Neck Cancers

por Cheng, Hui, Yang, Xinping, Si, Han, Saleh, Anthony D., Xiao, Wenming, Coupar, Jamie, Gollin, Susanne M., Ferris, Robert L., Issaeva, Natalia, Yarbrough, Wendell G., Prince, Mark E., Carey, Thomas E., Van Waes, Carter, Chen, Zhong
Publicado 2018

Congenital B cell lymphocytosis explained by novel germline CARD11 mutations

por Snow, Andrew L., Xiao, Wenming, Stinson, Jeffrey R., Lu, Wei, Chaigne-Delalande, Benjamin, Zheng, Lixin, Pittaluga, Stefania, Matthews, Helen F., Schmitz, Roland, Jhavar, Sameer, Kuchen, Stefan, Kardava, Lela, Wang, Wei, Lamborn, Ian T., Jing, Huie, Raffeld, Mark, Moir, Susan, Fleisher, Thomas A., Staudt, Louis M., Su, Helen C., Lenardo, Michael J.
Publicado 2012

TNF-α modulates genome-wide redistribution of ΔNp63α/TAp73 and NF-κB c-REL interactive binding on TP53 and AP-1 motifs to promote an oncogenic gene program in squamous cancer

por Si, Han, Lu, Hai, Yang, Xinping, Mattox, Austin, Jang, Minyoung, Bian, Yansong, Sano, Eleanor, Viadiu, Hector, Yan, Bin, Yau, Christina, Ng, Sam, Lee, Steven K., Romano, Rose-Anne, Davis, Sean, Walker, Robert L., Xiao, Wenming, Sun, Hongwei, Wei, Lai, Sinha, Satrajit, Benz, Christopher C, Stuart, Joshua M., Meltzer, Paul S., Van Waes, Carter, Chen, Zhong
Publicado 2016