BSMAP: whole genome bisulfite sequence MAPping program

por Xi, Yuanxin, Li, Wei
Publicado 2009

Baseline Correction for NMR Spectroscopic Metabolomics Data Analysis

por Xi, Yuanxin, Rocke, David M
Publicado 2008

Isolation and transcriptional characterization of mouse perivascular astrocytes

por Yosef, Nejla, Xi, Yuanxin, McCarty, Joseph H.
Publicado 2020

A Statistical Method for the Detection of Alternative Splicing Using RNA-Seq

por Wang, Liguo, Xi, Yuanxin, Yu, Jun, Dong, Liping, Yen, Laising, Li, Wei
Publicado 2010

The genomic landscape of estrogen receptor α binding sites in mouse mammary gland

por Palaniappan, Murugesan, Nguyen, Loc, Grimm, Sandra L., Xi, Yuanxin, Xia, Zheng, Li, Wei, Coarfa, Cristian
Publicado 2019

DANPOS: Dynamic analysis of nucleosome position and occupancy by sequencing

por Chen, Kaifu, Xi, Yuanxin, Pan, Xuewen, Li, Zhaoyu, Kaestner, Klaus, Tyler, Jessica, Dent, Sharon, He, Xiangwei, Li, Wei
Publicado 2013

MOABS: model based analysis of bisulfite sequencing data

por Sun, Deqiang, Xi, Yuanxin, Rodriguez, Benjamin, Park, Hyun Jung, Tong, Pan, Meong, Mira, Goodell, Margaret A, Li, Wei
Publicado 2014

SIRT6 deacetylates H3K18Ac at pericentric chromatin to prevent mitotic errors and cell senescence

por Tasselli, Luisa, Xi, Yuanxin, Zheng, Wei, Tennen, Ruth I., Odrowaz, Zaneta, Simeoni, Federica, Li, Wei, Chua, Katrin F.
Publicado 2016

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes

por Li, Xu, Wang, Wenqi, Wang, Jiadong, Malovannaya, Anna, Xi, Yuanxin, Li, Wei, Guerra, Rudy, Hawke, David H, Qin, Jun, Chen, Junjie
Publicado 2015

G9a-mediated methylation of ERα links the PHF20/MOF histone acetyltransferase complex to hormonal gene expression

por Zhang, Xi, Peng, Danni, Xi, Yuanxin, Yuan, Chao, Sagum, Cari A., Klein, Brianna J., Tanaka, Kaori, Wen, Hong, Kutateladze, Tatiana G., Li, Wei, Bedford, Mark T., Shi, Xiaobing
Publicado 2016

Addiction to Golgi-resident PI4P synthesis in chromosome 1q21.3–amplified lung adenocarcinoma cells

por Shi, Lei, Tan, Xiaochao, Liu, Xin, Yu, Jiang, Bota-Rabassedas, Neus, Niu, Yichi, Luo, Jiayi, Xi, Yuanxin, Zong, Chenghang, Creighton, Chad J., Glenn, Jeffrey S., Wang, Jing, Kurie, Jonathan M.
Publicado 2021

SIRT7 links H3K18 deacetylation to maintenance of oncogenic transformation

por Barber, Matthew F., Michishita-Kioi, Eriko, Xi, Yuanxin, Tasselli, Luisa, Kioi, Mitomu, Moqtaderi, Zarmik, Tennen, Ruth I., Paredes, Silvana, Young, Nicolas L., Chen, Kaifu, Struhl, Kevin, Garcia, Benjamin A., Gozani, Or, Li, Wei, Chua, Katrin F.
Publicado 2012

YEATS2 links histone acetylation to tumorigenesis of non-small cell lung cancer

por Mi, Wenyi, Guan, Haipeng, Lyu, Jie, Zhao, Dan, Xi, Yuanxin, Jiang, Shiming, Andrews, Forest H., Wang, Xiaolu, Gagea, Mihai, Wen, Hong, Tora, Laszlo, Dent, Sharon Y. R., Kutateladze, Tatiana G., Li, Wei, Li, Haitao, Shi, Xiaobing
Publicado 2017

Genomic characterization of human papillomavirus-positive and -negative human squamous cell cancer cell lines

por Kalu, Nene N., Mazumdar, Tuhina, Peng, Shaohua, Shen, Li, Sambandam, Vaishnavi, Rao, Xiayu, Xi, Yuanxin, Li, Lerong, Qi, Yuan, Gleber-Netto, Frederico O., Patel, Ameeta, Wang, Jing, Frederick, Mitchell J., Myers, Jeffrey N., Pickering, Curtis R., Johnson, Faye M.
Publicado 2017

Comprehensive Genomic Characterization of Parathyroid Cancer Identifies Novel Candidate Driver Mutations and Core Pathways

por Clarke, Callisia N, Katsonis, Panagiotis, Hsu, Teng-Kuei, Koire, Amanda M, Silva-Figueroa, Angelica, Christakis, Ioannis, Williams, Michelle D, Kutahyalioglu, Merve, Kwatampora, Lily, Xi, Yuanxin, Lee, Jeffrey E, Koptez, E Scott, Busaidy, Naifa L, Perrier, Nancy D, Lichtarge, Olivier
Publicado 2018

Mutation-Agnostic Detection of Colorectal Cancer Using Liquid Biopsy-Based Methylation-Specific Signatures

por Gouda, Mohamed A, Duose, Dzifa Y, Lapin, Morten, Zalles, Stephanie, Huang, Helen J, Xi, Yuanxin, Zheng, Xiaofeng, Aldesoky, Amira I, Alhanafy, Alshimaa M, Shehata, Mohamed A, Wang, Jing, Kopetz, Scott, Meric-Bernstam, Funda, Wistuba, Ignacio I, Luthra, Rajyalakshmi, Janku, Filip
Publicado 2022

Enhancer transcription reveals subtype-specific gene expression programs controlling breast cancer pathogenesis

por Franco, Hector L., Nagari, Anusha, Malladi, Venkat S., Li, Wenqian, Xi, Yuanxin, Richardson, Dana, Allton, Kendra L., Tanaka, Kaori, Li, Jing, Murakami, Shino, Keyomarsi, Khandan, Bedford, Mark T., Shi, Xiaobing, Li, Wei, Barton, Michelle C., Dent, Sharon Y.R., Kraus, W. Lee
Publicado 2018

ENL links histone acetylation to oncogenic gene expression in AML

por Wan, Liling, Wen, Hong, Li, Yuanyuan, Lyu, Jie, Xi, Yuanxin, Hoshii, Takayuki, Joseph, Julia, Wang, Xiaolu, Loh, Yong-Hwee E., Erb, Michael A., Souza, Amanda L., Bradner, James E., Shen, Li, Li, Wei, Li, Haitao, Allis, C. David, Armstrong, Scott A., Shi, Xiaobing
Publicado 2017

Histone modification profiling in breast cancer cell lines highlights commonalities and differences among subtypes

por Xi, Yuanxin, Shi, Jiejun, Li, Wenqian, Tanaka, Kaori, Allton, Kendra L., Richardson, Dana, Li, Jing, Franco, Hector L., Nagari, Anusha, Malladi, Venkat S., Coletta, Luis Della, Simper, Melissa S., Keyomarsi, Khandan, Shen, Jianjun, Bedford, Mark T., Shi, Xiaobing, Barton, Michelle C., Kraus, W. Lee, Li, Wei, Dent, Sharon Y. R.
Publicado 2018

SIK2 inhibition enhances PARP inhibitor activity synergistically in ovarian and triple-negative breast cancers

por Lu, Zhen, Mao, Weiqun, Yang, Hailing, Santiago-O’Farrill, Janice M., Rask, Philip J., Mondal, Jayanta, Chen, Hu, Ivan, Cristina, Liu, Xiuping, Liu, Chang-Gong, Xi, Yuanxin, Masuda, Kenta, Carrami, Eli M., Chen, Meng, Tang, Yitao, Pang, Lan, Lakomy, David S., Calin, George A., Liang, Han, Ahmed, Ahmed A., Vankayalapati, Hariprasad, Bast, Robert C.
Publicado 2022