Derivative-free neural network for optimizing the scoring functions associated with dynamic programming of pairwise-profile alignment

por Yamada, Kazunori D.
Publicado 2018

De novo profile generation based on sequence context specificity with the long short-term memory network

por Yamada, Kazunori D., Kinoshita, Kengo
Publicado 2018

Application of the MAFFT sequence alignment program to large data—reexamination of the usefulness of chained guide trees

por Yamada, Kazunori D., Tomii, Kentaro, Katoh, Kazutaka
Publicado 2016

MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization

por Katoh, Kazutaka, Rozewicki, John, Yamada, Kazunori D
Publicado 2017

Relation is an option for processing context information

por Yamada, Kazunori D, Baladram, M. Samy, Lin, Fangzhou
Publicado 2022

Structural characterization of single nucleotide variants at ligand binding sites and enzyme active sites of human proteins

por Yamada, Kazunori D., Nishi, Hafumi, Nakata, Junichi, Kinoshita, Kengo
Publicado 2016

Identification of the sequence determinants of protein N-terminal acetylation through a decision tree approach

por Yamada, Kazunori D., Omori, Satoshi, Nishi, Hafumi, Miyagi, Masaru
Publicado 2017

Parallelization of MAFFT for large-scale multiple sequence alignments

por Nakamura, Tsukasa, Yamada, Kazunori D, Tomii, Kentaro, Katoh, Kazutaka
Publicado 2018

Protein sequence-similarity search acceleration using a heuristic algorithm with a sensitive matrix

por Lim, Kyungtaek, Yamada, Kazunori D., Frith, Martin C., Tomii, Kentaro
Publicado 2017

Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids

por Yamada, Kazunori D., Kunishima, Naoki, Matsuura, Yoshinori, Nakai, Koshiro, Naitow, Hisashi, Fukasawa, Yoshinori, Tomii, Kentaro
Publicado 2017

Serum Fatty Acid Composition Balance by Fuzzy C-Means Method in Individuals with or without Metabolic Dysfunction-Associated Fatty Liver Disease

por Nagase, Yuka, Satoh, Takao, Shigetome, Keiichi, Tokumaru, Naoto, Matsumoto, Erika, Yamada, Kazunori D., Imafuku, Tadashi, Watanabe, Hiroshi, Maruyama, Toru, Ogata, Yasuhiro, Yoshida, Minoru, Saruwatari, Junji, Oniki, Kentaro
Publicado 2023