Activation of cell migration via morphological changes in focal adhesions depends on shear stress in MYCN-amplified neuroblastoma cells

por Hiraiwa, Takumi, Yamada, Takahiro G., Miki, Norihisa, Funahashi, Akira, Hiroi, Noriko
Publicado 2019

Predicting the future direction of cell movement with convolutional neural networks

por Nishimoto, Shori, Tokuoka, Yuta, Yamada, Takahiro G., Hiroi, Noriko F., Funahashi, Akira
Publicado 2019

XitoSBML: A Modeling Tool for Creating Spatial Systems Biology Markup Language Models From Microscopic Images

por Ii, Kaito, Mashimo, Kota, Ozeki, Mitsunori, Yamada, Takahiro G., Hiroi, Noriko, Funahashi, Akira
Publicado 2019

Intercellular interaction mechanisms promote diversity in intracellular ATP concentration in Escherichia coli populations

por Nakatani, Ryo J., Itabashi, Masahiro, Yamada, Takahiro G., Hiroi, Noriko F., Funahashi, Akira
Publicado 2022

Titanium Culture Vessel Presenting Temperature Gradation for the Thermotolerance Estimation of Cells

por Imashiro, Chikahiro, Jin, Yangyan, Hayama, Motoaki, Yamada, Takahiro G., Funahashi, Akira, Sakaguchi, Katsuhisa, Umezu, Shinjiro, Komotori, Jun
Publicado 2023

Identification of a master transcription factor and a regulatory mechanism for desiccation tolerance in the anhydrobiotic cell line Pv11

por Yamada, Takahiro G., Hiki, Yusuke, Hiroi, Noriko F., Shagimardanova, Elena, Gusev, Oleg, Cornette, Richard, Kikawada, Takahiro, Funahashi, Akira
Publicado 2020

Quantitative analysis of sensitivity to a Wnt3a gradient in determination of the pole‐to‐pole axis of mitotic cells by using a microfluidic device

por Hiraiwa, Takumi, Nakai, Yuichiro, Yamada, Takahiro G., Tanimoto, Ryuichi, Kimura, Hiroshi, Matsumoto, Yoshinori, Miki, Norihisa, Hiroi, Noriko, Funahashi, Akira
Publicado 2018

Transcriptome analysis of the anhydrobiotic cell line Pv11 infers the mechanism of desiccation tolerance and recovery

por Yamada, Takahiro G., Suetsugu, Yoshitaka, Deviatiiarov, Ruslan, Gusev, Oleg, Cornette, Richard, Nesmelov, Alexander, Hiroi, Noriko, Kikawada, Takahiro, Funahashi, Akira
Publicado 2018

3D convolutional neural networks-based segmentation to acquire quantitative criteria of the nucleus during mouse embryogenesis

por Tokuoka, Yuta, Yamada, Takahiro G., Mashiko, Daisuke, Ikeda, Zenki, Hiroi, Noriko F., Kobayashi, Tetsuya J., Yamagata, Kazuo, Funahashi, Akira
Publicado 2020

Genome-Wide Role of HSF1 in Transcriptional Regulation of Desiccation Tolerance in the Anhydrobiotic Cell Line, Pv11

por Tokumoto, Shoko, Miyata, Yugo, Deviatiiarov, Ruslan, Yamada, Takahiro G., Hiki, Yusuke, Kozlova, Olga, Yoshida, Yuki, Cornette, Richard, Funahashi, Akira, Shagimardanova, Elena, Gusev, Oleg, Kikawada, Takahiro
Publicado 2021

Cas9-mediated genome editing reveals a significant contribution of calcium signaling pathways to anhydrobiosis in Pv11 cells

por Miyata, Yugo, Fuse, Hiroto, Tokumoto, Shoko, Hiki, Yusuke, Deviatiiarov, Ruslan, Yoshida, Yuki, Yamada, Takahiro G., Cornette, Richard, Gusev, Oleg, Shagimardanova, Elena, Funahashi, Akira, Kikawada, Takahiro
Publicado 2021

High quality genome assembly of the anhydrobiotic midge provides insights on a single chromosome-based emergence of extreme desiccation tolerance

por Yoshida, Yuki, Shaikhutdinov, Nurislam, Kozlova, Olga, Itoh, Masayoshi, Tagami, Michihira, Murata, Mitsuyoshi, Nishiyori-Sueki, Hiromi, Kojima-Ishiyama, Miki, Noma, Shohei, Cherkasov, Alexander, Gazizova, Guzel, Nasibullina, Aigul, Deviatiiarov, Ruslan, Shagimardanova, Elena, Ryabova, Alina, Yamaguchi, Katsushi, Bino, Takahiro, Shigenobu, Shuji, Tokumoto, Shoko, Miyata, Yugo, Cornette, Richard, Yamada, Takahiro G, Funahashi, Akira, Tomita, Masaru, Gusev, Oleg, Kikawada, Takahiro
Publicado 2022

COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms

por Ostaszewski, Marek, Niarakis, Anna, Mazein, Alexander, Kuperstein, Inna, Phair, Robert, Orta‐Resendiz, Aurelio, Singh, Vidisha, Aghamiri, Sara Sadat, Acencio, Marcio Luis, Glaab, Enrico, Ruepp, Andreas, Fobo, Gisela, Montrone, Corinna, Brauner, Barbara, Frishman, Goar, Monraz Gómez, Luis Cristóbal, Somers, Julia, Hoch, Matti, Kumar Gupta, Shailendra, Scheel, Julia, Borlinghaus, Hanna, Czauderna, Tobias, Schreiber, Falk, Montagud, Arnau, Ponce de Leon, Miguel, Funahashi, Akira, Hiki, Yusuke, Hiroi, Noriko, Yamada, Takahiro G, Dräger, Andreas, Renz, Alina, Naveez, Muhammad, Bocskei, Zsolt, Messina, Francesco, Börnigen, Daniela, Fergusson, Liam, Conti, Marta, Rameil, Marius, Nakonecnij, Vanessa, Vanhoefer, Jakob, Schmiester, Leonard, Wang, Muying, Ackerman, Emily E, Shoemaker, Jason E, Zucker, Jeremy, Oxford, Kristie, Teuton, Jeremy, Kocakaya, Ebru, Summak, Gökçe Yağmur, Hanspers, Kristina, Kutmon, Martina, Coort, Susan, Eijssen, Lars, Ehrhart, Friederike, Rex, Devasahayam Arokia Balaya, Slenter, Denise, Martens, Marvin, Pham, Nhung, Haw, Robin, Jassal, Bijay, Matthews, Lisa, Orlic‐Milacic, Marija, Senff Ribeiro, Andrea, Rothfels, Karen, Shamovsky, Veronica, Stephan, Ralf, Sevilla, Cristoffer, Varusai, Thawfeek, Ravel, Jean‐Marie, Fraser, Rupsha, Ortseifen, Vera, Marchesi, Silvia, Gawron, Piotr, Smula, Ewa, Heirendt, Laurent, Satagopam, Venkata, Wu, Guanming, Riutta, Anders, Golebiewski, Martin, Owen, Stuart, Goble, Carole, Hu, Xiaoming, Overall, Rupert W, Maier, Dieter, Bauch, Angela, Gyori, Benjamin M, Bachman, John A, Vega, Carlos, Grouès, Valentin, Vazquez, Miguel, Porras, Pablo, Licata, Luana, Iannuccelli, Marta, Sacco, Francesca, Nesterova, Anastasia, Yuryev, Anton, de Waard, Anita, Turei, Denes, Luna, Augustin, Babur, Ozgun, Soliman, Sylvain, Valdeolivas, Alberto, Esteban‐Medina, Marina, Peña‐Chilet, Maria, Rian, Kinza, Helikar, Tomáš, Puniya, Bhanwar Lal, Modos, Dezso, Treveil, Agatha, Olbei, Marton, De Meulder, Bertrand, Ballereau, Stephane, Dugourd, Aurélien, Naldi, Aurélien, Noël, Vincent, Calzone, Laurence, Sander, Chris, Demir, Emek, Korcsmaros, Tamas, Freeman, Tom C, Augé, Franck, Beckmann, Jacques S, Hasenauer, Jan, Wolkenhauer, Olaf, Wilighagen, Egon L, Pico, Alexander R, Evelo, Chris T, Gillespie, Marc E, Stein, Lincoln D, Hermjakob, Henning, D'Eustachio, Peter, Saez‐Rodriguez, Julio, Dopazo, Joaquin, Valencia, Alfonso, Kitano, Hiroaki, Barillot, Emmanuel, Auffray, Charles, Balling, Rudi, Schneider, Reinhard
Publicado 2021

COVID‐19 Disease Map, a computational knowledge repository of virus‐host interaction mechanisms

por Ostaszewski, Marek, Niarakis, Anna, Mazein, Alexander, Kuperstein, Inna, Phair, Robert, Orta‐Resendiz, Aurelio, Singh, Vidisha, Aghamiri, Sara Sadat, Acencio, Marcio Luis, Glaab, Enrico, Ruepp, Andreas, Fobo, Gisela, Montrone, Corinna, Brauner, Barbara, Frishman, Goar, Monraz Gómez, Luis Cristóbal, Somers, Julia, Hoch, Matti, Kumar Gupta, Shailendra, Scheel, Julia, Borlinghaus, Hanna, Czauderna, Tobias, Schreiber, Falk, Montagud, Arnau, Ponce de Leon, Miguel, Funahashi, Akira, Hiki, Yusuke, Hiroi, Noriko, Yamada, Takahiro G, Dräger, Andreas, Renz, Alina, Naveez, Muhammad, Bocskei, Zsolt, Messina, Francesco, Börnigen, Daniela, Fergusson, Liam, Conti, Marta, Rameil, Marius, Nakonecnij, Vanessa, Vanhoefer, Jakob, Schmiester, Leonard, Wang, Muying, Ackerman, Emily E, Shoemaker, Jason E, Zucker, Jeremy, Oxford, Kristie, Teuton, Jeremy, Kocakaya, Ebru, Summak, Gökçe Yağmur, Hanspers, Kristina, Kutmon, Martina, Coort, Susan, Eijssen, Lars, Ehrhart, Friederike, Rex, D A B, Slenter, Denise, Martens, Marvin, Pham, Nhung, Haw, Robin, Jassal, Bijay, Matthews, Lisa, Orlic‐Milacic, Marija, Senff‐Ribeiro, Andrea, Rothfels, Karen, Shamovsky, Veronica, Stephan, Ralf, Sevilla, Cristoffer, Varusai, Thawfeek, Ravel, Jean‐Marie, Fraser, Rupsha, Ortseifen, Vera, Marchesi, Silvia, Gawron, Piotr, Smula, Ewa, Heirendt, Laurent, Satagopam, Venkata, Wu, Guanming, Riutta, Anders, Golebiewski, Martin, Owen, Stuart, Goble, Carole, Hu, Xiaoming, Overall, Rupert W, Maier, Dieter, Bauch, Angela, Gyori, Benjamin M, Bachman, John A, Vega, Carlos, Grouès, Valentin, Vazquez, Miguel, Porras, Pablo, Licata, Luana, Iannuccelli, Marta, Sacco, Francesca, Nesterova, Anastasia, Yuryev, Anton, de Waard, Anita, Turei, Denes, Luna, Augustin, Babur, Ozgun, Soliman, Sylvain, Valdeolivas, Alberto, Esteban‐Medina, Marina, Peña‐Chilet, Maria, Rian, Kinza, Helikar, Tomáš, Puniya, Bhanwar Lal, Modos, Dezso, Treveil, Agatha, Olbei, Marton, De Meulder, Bertrand, Ballereau, Stephane, Dugourd, Aurélien, Naldi, Aurélien, Noël, Vincent, Calzone, Laurence, Sander, Chris, Demir, Emek, Korcsmaros, Tamas, Freeman, Tom C, Augé, Franck, Beckmann, Jacques S, Hasenauer, Jan, Wolkenhauer, Olaf, Willighagen, Egon L, Pico, Alexander R, Evelo, Chris T, Gillespie, Marc E, Stein, Lincoln D, Hermjakob, Henning, D'Eustachio, Peter, Saez‐Rodriguez, Julio, Dopazo, Joaquin, Valencia, Alfonso, Kitano, Hiroaki, Barillot, Emmanuel, Auffray, Charles, Balling, Rudi, Schneider, Reinhard
Publicado 2021