Weak correlation between sequence conservation in promoter regions and in protein-coding regions of human-mouse orthologous gene pairs

por Chiba, Hirokazu, Yamashita, Riu, Kinoshita, Kengo, Nakai, Kenta
Publicado 2008

Effects of Alu elements on global nucleosome positioning in the human genome

por Tanaka, Yoshiaki, Yamashita, Riu, Suzuki, Yutaka, Nakai, Kenta
Publicado 2010

DBTSS: DataBase of Transcriptional Start Sites progress report in 2012

por Yamashita, Riu, Sugano, Sumio, Suzuki, Yutaka, Nakai, Kenta
Publicado 2012

Melina II: a web tool for comparisons among several predictive algorithms to find potential motifs from promoter regions

por Okumura, Toshiyuki, Makiguchi, Hiroki, Makita, Yuko, Yamashita, Riu, Nakai, Kenta
Publicado 2007

DBTSS: database of transcription start sites, progress report 2008

por Wakaguri, Hiroyuki, Yamashita, Riu, Suzuki, Yutaka, Sugano, Sumio, Nakai, Kenta
Publicado 2008

DBTSS provides a tissue specific dynamic view of Transcription Start Sites

por Yamashita, Riu, Wakaguri, Hiroyuki, Sugano, Sumio, Suzuki, Yutaka, Nakai, Kenta
Publicado 2010

Classification and characterization of alternative promoters in 26 lung adenocarcinoma cell lines

por Hamaya, Yamato, Suzuki, Ayako, Suzuki, Yutaka, Tsuchihara, Katsuya, Yamashita, Riu
Publicado 2022

DBTSS: DataBase of Human Transcription Start Sites, progress report 2006

por Yamashita, Riu, Suzuki, Yutaka, Wakaguri, Hiroyuki, Tsuritani, Katsuki, Nakai, Kenta, Sugano, Sumio
Publicado 2006

DBTGR: a database of tunicate promoters and their regulatory elements

por Sierro, Nicolas, Kusakabe, Takehiro, Park, Keun-Joon, Yamashita, Riu, Kinoshita, Kengo, Nakai, Kenta
Publicado 2006

Comprehensive detection of human terminal oligo-pyrimidine (TOP) genes and analysis of their characteristics

por Yamashita, Riu, Suzuki, Yutaka, Takeuchi, Nono, Wakaguri, Hiroyuki, Ueda, Takuya, Sugano, Sumio, Nakai, Kenta
Publicado 2008

The Babesia bovis gene and promoter model: an update from full-length EST analysis

por Yamagishi, Junya, Wakaguri, Hiroyuki, Yokoyama, Naoaki, Yamashita, Riu, Suzuki, Yutaka, Xuan, Xuenan, Igarashi, Ikuo
Publicado 2014

Comparison of Boiling and Robotics Automation Method in DNA Extraction for Metagenomic Sequencing of Human Oral Microbes

por Yamagishi, Junya, Sato, Yukuto, Shinozaki, Natsuko, Ye, Bin, Tsuboi, Akito, Nagasaki, Masao, Yamashita, Riu
Publicado 2016

Cancer gene expression database (CGED): a database for gene expression profiling with accompanying clinical information of human cancer tissues

por Kato, Kikuya, Yamashita, Riu, Matoba, Ryo, Monden, Morito, Noguchi, Shinzaburo, Takagi, Toshihisa, Nakai, Kenta
Publicado 2005

Profiling ascidian promoters as the primordial type of vertebrate promoter

por Okamura, Kohji, Yamashita, Riu, Takimoto, Noriko, Nishitsuji, Koki, Suzuki, Yutaka, Kusakabe, Takehiro G, Nakai, Kenta
Publicado 2011

DBTSS as an integrative platform for transcriptome, epigenome and genome sequence variation data

por Suzuki, Ayako, Wakaguri, Hiroyuki, Yamashita, Riu, Kawano, Shin, Tsuchihara, Katsuya, Sugano, Sumio, Suzuki, Yutaka, Nakai, Kenta
Publicado 2014

Predicting promoter activities of primary human DNA sequences

por Irie, Takuma, Park, Sung-Joon, Yamashita, Riu, Seki, Masahide, Yada, Tetsushi, Sugano, Sumio, Nakai, Kenta, Suzuki, Yutaka
Publicado 2011

Characterization of Transcription Start Sites of Putative Non-coding RNAs by Multifaceted Use of Massively Paralleled Sequencer

por Sathira, Nuankanya, Yamashita, Riu, Tanimoto, Kousuke, Kanai, Akinori, Arauchi, Takako, Kanematsu, Soutaro, Nakai, Kenta, Suzuki, Yutaka, Sugano, Sumio
Publicado 2010

Inter-Individual Differences in the Oral Bacteriome Are Greater than Intra-Day Fluctuations in Individuals

por Sato, Yukuto, Yamagishi, Junya, Yamashita, Riu, Shinozaki, Natsuko, Ye, Bin, Yamada, Takuji, Yamamoto, Masayuki, Nagasaki, Masao, Tsuboi, Akito
Publicado 2015

Comparative sequence analysis of patient-matched primary colorectal cancer, metastatic, and recurrent metastatic tumors after adjuvant FOLFOX chemotherapy

por Harada, Kazuaki, Okamoto, Wataru, Mimaki, Sachiyo, Kawamoto, Yasuyuki, Bando, Hideaki, Yamashita, Riu, Yuki, Satoshi, Yoshino, Takayuki, Komatsu, Yoshito, Ohtsu, Atsushi, Sakamoto, Naoya, Tsuchihara, Katsuya
Publicado 2019

Omics profiles of fecal and oral microbiota change in irritable bowel syndrome patients with diarrhea and symptom exacerbation

por Tanaka, Yukari, Yamashita, Riu, Kawashima, Junko, Mori, Hiroshi, Kurokawa, Ken, Fukuda, Shinji, Gotoh, Yasuhiro, Nakamura, Keiji, Hayashi, Tetsuya, Kasahara, Yoshiyuki, Sato, Yukuto, Fukudo, Shin
Publicado 2022