A note on the determination of non-inferiority margins with application in oncology clinical trials()

por Yu, Binbing, Yang, Harry, Sabin, Antony
Publicado 2019

Hidden treasures in contemporary RNA sequencing

por Mangul, Serghei, Yang, Harry Taegyun, Eskin, Eleazar, Zaitlen, Noah
Publicado 2019

Regional Variation of Splicing QTLs in Human Brain

por Zhang, Yida, Yang, Harry Taegyun, Kadash-Edmondson, Kathryn, Pan, Yang, Pan, Zhicheng, Davidson, Beverly L., Xing, Yi
Publicado 2020

The RNA-binding proteins hnRNP H and F regulate splicing of a MYC-dependent HRAS exon in prostate cancer cells

por Chen, Xinyuan, Yang, Harry Taegyun, Zhang, Beatrice, Phillips, John W., Cheng, Donghui, Rigo, Frank, Witte, Owen N., Xing, Yi, Black, Douglas L.
Publicado 2023

Effects of protein G-quadruplex interactions on phase transitions and protein aggregation

por Sahoo, Bikash R., Kocman, Vojč, Clark, Nathan, Myers, Nikhil, Deng, Xiexiong, Wong, Ee L., Yang, Harry J., Kotar, Anita, Guzman, Bryan B., Dominguez, Daniel, Plavec, Janez, Bardwell, James C.A.
Publicado 2023

Pathway-guided analysis identifies Myc-dependent alternative pre-mRNA splicing in aggressive prostate cancers

por Phillips, John W., Pan, Yang, Tsai, Brandon L., Xie, Zhijie, Demirdjian, Levon, Xiao, Wen, Yang, Harry T., Zhang, Yida, Lin, Chia Ho, Cheng, Donghui, Hu, Qiang, Liu, Song, Black, Douglas L., Witte, Owen N., Xing, Yi
Publicado 2020

RNA-seq data science: From raw data to effective interpretation

por Deshpande, Dhrithi, Chhugani, Karishma, Chang, Yutong, Karlsberg, Aaron, Loeffler, Caitlin, Zhang, Jinyang, Muszyńska, Agata, Munteanu, Viorel, Yang, Harry, Rotman, Jeremy, Tao, Laura, Balliu, Brunilda, Tseng, Elizabeth, Eskin, Eleazar, Zhao, Fangqing, Mohammadi, Pejman, P. Łabaj, Paweł, Mangul, Serghei
Publicado 2023

Technology dictates algorithms: recent developments in read alignment

por Alser, Mohammed, Rotman, Jeremy, Deshpande, Dhrithi, Taraszka, Kodi, Shi, Huwenbo, Baykal, Pelin Icer, Yang, Harry Taegyun, Xue, Victor, Knyazev, Sergey, Singer, Benjamin D., Balliu, Brunilda, Koslicki, David, Skums, Pavel, Zelikovsky, Alex, Alkan, Can, Mutlu, Onur, Mangul, Serghei
Publicado 2021

Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia

por Olde Loohuis, Loes M., Mangul, Serghei, Ori, Anil P. S., Jospin, Guillaume, Koslicki, David, Yang, Harry Taegyun, Wu, Timothy, Boks, Marco P., Lomen-Hoerth, Catherine, Wiedau-Pazos, Martina, Cantor, Rita M., de Vos, Willem M., Kahn, René S., Eskin, Eleazar, Ophoff, Roel A.
Publicado 2018

Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing

por Mandric, Igor, Rotman, Jeremy, Yang, Harry Taegyun, Strauli, Nicolas, Montoya, Dennis J., Van Der Wey, William, Ronas, Jiem R., Statz, Benjamin, Yao, Douglas, Petrova, Velislava, Zelikovsky, Alex, Spreafico, Roberto, Shifman, Sagiv, Zaitlen, Noah, Rossetti, Maura, Ansel, K. Mark, Eskin, Eleazar, Mangul, Serghei
Publicado 2020

Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing

por Mandric, Igor, Rotman, Jeremy, Yang, Harry Taegyun, Strauli, Nicolas, Montoya, Dennis J., Van Der Wey, William, Ronas, Jiem R., Statz, Benjamin, Yao, Douglas, Petrova, Velislava, Zelikovsky, Alex, Spreafico, Roberto, Shifman, Sagiv, Zaitlen, Noah, Rossetti, Maura, Ansel, K. Mark, Eskin, Eleazar, Mangul, Serghei
Publicado 2020

ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues

por Mangul, Serghei, Yang, Harry Taegyun, Strauli, Nicolas, Gruhl, Franziska, Porath, Hagit T., Hsieh, Kevin, Chen, Linus, Daley, Timothy, Christenson, Stephanie, Wesolowska-Andersen, Agata, Spreafico, Roberto, Rios, Cydney, Eng, Celeste, Smith, Andrew D., Hernandez, Ryan D., Ophoff, Roel A., Santana, Jose Rodriguez, Levanon, Erez Y., Woodruff, Prescott G., Burchard, Esteban, Seibold, Max A., Shifman, Sagiv, Eskin, Eleazar, Zaitlen, Noah
Publicado 2018

Benchmarking of computational error-correction methods for next-generation sequencing data

por Mitchell, Keith, Brito, Jaqueline J., Mandric, Igor, Wu, Qiaozhen, Knyazev, Sergey, Chang, Sei, Martin, Lana S., Karlsberg, Aaron, Gerasimov, Ekaterina, Littman, Russell, Hill, Brian L., Wu, Nicholas C., Yang, Harry Taegyun, Hsieh, Kevin, Chen, Linus, Littman, Eli, Shabani, Taylor, Enik, German, Yao, Douglas, Sun, Ren, Schroeder, Jan, Eskin, Eleazar, Zelikovsky, Alex, Skums, Pavel, Pop, Mihai, Mangul, Serghei
Publicado 2020

IRIS: Discovery of cancer immunotherapy targets arising from pre-mRNA alternative splicing

por Pan, Yang, Phillips, John W., Zhang, Beatrice D., Noguchi, Miyako, Kutschera, Eric, McLaughlin, Jami, Nesterenko, Pavlo A., Mao, Zhiyuan, Bangayan, Nathanael J., Wang, Robert, Tran, Wendy, Yang, Harry T., Wang, Yuanyuan, Xu, Yang, Obusan, Matthew B., Cheng, Donghui, Lee, Alex H., Kadash-Edmondson, Kathryn E., Champhekar, Ameya, Puig-Saus, Cristina, Ribas, Antoni, Prins, Robert M., Seet, Christopher S., Crooks, Gay M., Witte, Owen N., Xing, Yi
Publicado 2023