Probing regulon of ArcA in Shewanella oneidensis MR-1 by integrated genomic analyses

por Gao, Haichun, Wang, Xiaohu, Yang, Zamin K, Palzkill, Timothy, Zhou, Jizhong
Publicado 2008

Physiological Roles of ArcA, Crp, and EtrA and Their Interactive Control on Aerobic and Anaerobic Respiration in Shewanella oneidensis

por Gao, Haichun, Wang, Xiaohu, Yang, Zamin K., Chen, Jingrong, Liang, Yili, Chen, Haijiang, Palzkill, Timothy, Zhou, Jizhong
Publicado 2010

Climate-driven divergence in plant-microbiome interactions generates range-wide variation in bud break phenology

por Ware, Ian M., Van Nuland, Michael E., Yang, Zamin K., Schadt, Christopher W., Schweitzer, Jennifer A., Bailey, Joseph K.
Publicado 2021

Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress

por Yang, Shihui, Giannone, Richard J, Dice, Lezlee, Yang, Zamin K, Engle, Nancy L, Tschaplinski, Timothy J, Hettich, Robert L, Brown, Steven D
Publicado 2012

Rhizosphere microbiomes diverge among Populus trichocarpa plant-host genotypes and chemotypes, but it depends on soil origin

por Veach, Allison M., Morris, Reese, Yip, Daniel Z., Yang, Zamin K., Engle, Nancy L., Cregger, Melissa A., Tschaplinski, Timothy J., Schadt, Christopher W.
Publicado 2019

Plant Hosts Modify Belowground Microbial Community Response to Extreme Drought

por Veach, Allison M., Chen, Huaihai, Yang, Zamin K., Labbe, Audrey D., Engle, Nancy L., Tschaplinski, Timothy J., Schadt, Christopher W., Cregger, Melissa A.
Publicado 2020

Correction to: Rhizosphere microbiomes diverge among Populus trichocarpa plant-host genotypes and chemotypes, but it depends on soil origin

por Veach, Allison M., Morris, Reese, Yip, Daniel Z., Yang, Zamin K., Engle, Nancy L., Cregger, Melissa A., Tschaplinski, Timothy J., Schadt, Christopher W.
Publicado 2021

Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments

por Miller, Lance D, Mosher, Jennifer J, Venkateswaran, Amudhan, Yang, Zamin K, Palumbo, Anthony V, Phelps, Tommy J, Podar, Mircea, Schadt, Christopher W, Keller, Martin
Publicado 2010

Mathematical models of lignin biosynthesis

por Faraji, Mojdeh, Fonseca, Luis L., Escamilla-Treviño, Luis, Barros-Rios, Jaime, Engle, Nancy, Yang, Zamin K., Tschaplinski, Timothy J., Dixon, Richard A., Voit, Eberhard O.
Publicado 2018

A Multifactor Analysis of Fungal and Bacterial Community Structure in the Root Microbiome of Mature Populus deltoides Trees

por Shakya, Migun, Gottel, Neil, Castro, Hector, Yang, Zamin K., Gunter, Lee, Labbé, Jessy, Muchero, Wellington, Bonito, Gregory, Vilgalys, Rytas, Tuskan, Gerald, Podar, Mircea, Schadt, Christopher W.
Publicado 2013

A dynamic model of lignin biosynthesis in Brachypodium distachyon

por Faraji, Mojdeh, Fonseca, Luis L., Escamilla-Treviño, Luis, Barros-Rios, Jaime, Engle, Nancy L., Yang, Zamin K., Tschaplinski, Timothy J., Dixon, Richard A., Voit, Eberhard O.
Publicado 2018

Scavenging organic nitrogen and remodelling lipid metabolism are key survival strategies adopted by the endophytic fungi, Serendipita vermifera and Serendipita bescii to alleviate...

por Ray, Prasun, Abraham, Paul E., Guo, Yingqing, Giannone, Richard J., Engle, Nancy L., Yang, Zamin K., Jacobson, Daniel, Hettich, Robert L., Tschaplinski, Timothy J., Craven, Kelly D.
Publicado 2019

Characterization of Archaeal Community in Contaminated and Uncontaminated Surface Stream Sediments

por Porat, Iris, Vishnivetskaya, Tatiana A., Mosher, Jennifer J., Brandt, Craig C., Yang, Zamin K., Brooks, Scott C., Liang, Liyuan, Drake, Meghan M., Podar, Mircea, Brown, Steven D., Palumbo, Anthony V.
Publicado 2010

Morphine and high-fat diet differentially alter the gut microbiota composition and metabolic function in lean versus obese mice

por Blakeley-Ruiz, J. Alfredo, McClintock, Carlee S., Shrestha, Him K., Poudel, Suresh, Yang, Zamin K., Giannone, Richard J., Choo, James J., Podar, Mircea, Baghdoyan, Helen A., Lydic, Ralph, Hettich, Robert L.
Publicado 2022

One-time nitrogen fertilization shifts switchgrass soil microbiomes within a context of larger spatial and temporal variation

por Chen, Huaihai, Yang, Zamin K., Yip, Dan, Morris, Reese H., Lebreux, Steven J., Cregger, Melissa A., Klingeman, Dawn M., Hui, Dafeng, Hettich, Robert L., Wilhelm, Steven W., Wang, Gangsheng, Löffler, Frank E., Schadt, Christopher W.
Publicado 2019

Hexavalent Chromium Reduction under Fermentative Conditions with Lactate Stimulated Native Microbial Communities

por Somenahally, Anil C., Mosher, Jennifer J., Yuan, Tong, Podar, Mircea, Phelps, Tommy J., Brown, Steven D., Yang, Zamin K., Hazen, Terry C., Arkin, Adam P., Palumbo, Anthony V., Van Nostrand, Joy D., Zhou, Jizhong, Elias, Dwayne A.
Publicado 2013

Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis

por Utturkar, Sagar M., Cude, W. Nathan, Robeson, Michael S., Yang, Zamin K., Klingeman, Dawn M., Land, Miriam L., Allman, Steve L., Lu, Tse-Yuan S., Brown, Steven D., Schadt, Christopher W., Podar, Mircea, Doktycz, Mitchel J., Pelletier, Dale A.
Publicado 2016

Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

por Liang, Xiaoyu, Whitham, Jason M., Holwerda, Evert K., Shao, Xiongjun, Tian, Liang, Wu, Yu-Wei, Lombard, Vincent, Henrissat, Bernard, Klingeman, Dawn M., Yang, Zamin K., Podar, Mircea, Richard, Tom L., Elkins, James G., Brown, Steven D., Lynd, Lee R.
Publicado 2018

Genome-scale resources for Thermoanaerobacterium saccharolyticum

por Currie, Devin H, Raman, Babu, Gowen, Christopher M, Tschaplinski, Timothy J, Land, Miriam L, Brown, Steven D, Covalla, Sean F, Klingeman, Dawn M, Yang, Zamin K, Engle, Nancy L, Johnson, Courtney M, Rodriguez, Miguel, Shaw, A Joe, Kenealy, William R, Lynd, Lee R, Fong, Stephen S, Mielenz, Jonathan R, Davison, Brian H, Hogsett, David A, Herring, Christopher D
Publicado 2015